Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.58□□□□□ -1.84
U3KQE9 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
U3KQE9 OR51H2P-202ENST00000641424 3046 ntBASIC3.57□□□□□ -1.84
U3KQE9 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
U3KQE9 SNORD114-7-201ENST00000362520 77 ntBASIC3.57□□□□□ -1.84
U3KQE9 RNU6-1010P-201ENST00000362757 107 ntBASIC3.57□□□□□ -1.84
U3KQE9 RNU6-728P-201ENST00000365375 104 ntBASIC3.57□□□□□ -1.84
U3KQE9 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
U3KQE9 SNORA20-201ENST00000384662 132 ntBASIC3.57□□□□□ -1.84
U3KQE9 MIR15B-201ENST00000385045 98 ntBASIC3.57□□□□□ -1.84
U3KQE9 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
U3KQE9 RNA5SP113-201ENST00000410486 84 ntBASIC3.57□□□□□ -1.84
U3KQE9 COX6B1P1-201ENST00000415962 213 ntBASIC3.57□□□□□ -1.84
U3KQE9 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.57□□□□□ -1.84
U3KQE9 TBCAP1-201ENST00000436520 327 ntBASIC3.57□□□□□ -1.84
U3KQE9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.57□□□□□ -1.84
U3KQE9 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
U3KQE9 AL121914.1-201ENST00000450188 156 ntBASIC3.57□□□□□ -1.84
U3KQE9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.57□□□□□ -1.84
U3KQE9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.57□□□□□ -1.84
U3KQE9 AC107626.1-201ENST00000471084 183 ntBASIC3.57□□□□□ -1.84
U3KQE9 RN7SL132P-201ENST00000478131 296 ntBASIC3.57□□□□□ -1.84
U3KQE9 RN7SL808P-201ENST00000496066 299 ntBASIC3.57□□□□□ -1.84
U3KQE9 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.57□□□□□ -1.84
U3KQE9 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.57□□□□□ -1.84
U3KQE9 AP001328.1-201ENST00000528550 176 ntBASIC3.57□□□□□ -1.84
U3KQE9 HIGD1AP1-201ENST00000550979 275 ntBASIC3.57□□□□□ -1.84
U3KQE9 AC105129.1-201ENST00000560250 297 ntBASIC3.57□□□□□ -1.84
U3KQE9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
U3KQE9 PCGEM1.1-201ENST00000613431 131 ntBASIC3.57□□□□□ -1.84
U3KQE9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.57□□□□□ -1.84
U3KQE9 AC087385.3-201ENST00000620477 187 ntBASIC3.57□□□□□ -1.84
U3KQE9 AF127577.6-201ENST00000623352 2191 ntBASIC3.57□□□□□ -1.84
U3KQE9 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.57□□□□□ -1.84
U3KQE9 AL136164.3-201ENST00000624429 3978 ntBASIC3.57□□□□□ -1.84
U3KQE9 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
U3KQE9 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
U3KQE9 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
U3KQE9 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
U3KQE9 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
U3KQE9 Y_RNA.24-201ENST00000362508 103 ntBASIC3.56□□□□□ -1.84
U3KQE9 U3.8-201ENST00000363675 217 ntBASIC3.56□□□□□ -1.84
U3KQE9 Y_RNA.310-201ENST00000365063 113 ntBASIC3.56□□□□□ -1.84
U3KQE9 Y_RNA.341-201ENST00000365341 102 ntBASIC3.56□□□□□ -1.84
U3KQE9 RNU6-969P-201ENST00000383900 105 ntBASIC3.56□□□□□ -1.84
U3KQE9 AL645927.1-201ENST00000396783 406 ntBASIC3.56□□□□□ -1.84
U3KQE9 RN7SKP267-201ENST00000410381 285 ntBASIC3.56□□□□□ -1.84
U3KQE9 RNU6-855P-201ENST00000410395 104 ntBASIC3.56□□□□□ -1.84
U3KQE9 RNU6-1064P-201ENST00000410626 104 ntBASIC3.56□□□□□ -1.84
U3KQE9 RNU4-43P-201ENST00000410628 137 ntBASIC3.56□□□□□ -1.84
U3KQE9 RN7SKP100-201ENST00000411258 284 ntBASIC3.56□□□□□ -1.84
U3KQE9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.56□□□□□ -1.84
U3KQE9 AL161651.1-201ENST00000440882 223 ntBASIC3.56□□□□□ -1.84
U3KQE9 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.56□□□□□ -1.84
U3KQE9 RPS27P1-201ENST00000450552 247 ntBASIC3.56□□□□□ -1.84
U3KQE9 AL441985.1-201ENST00000457727 251 ntBASIC3.56□□□□□ -1.84
U3KQE9 RPL36AP41-201ENST00000493820 306 ntBASIC3.56□□□□□ -1.84
U3KQE9 RNA5SP446-201ENST00000515955 82 ntBASIC3.56□□□□□ -1.84
U3KQE9 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.56□□□□□ -1.84
U3KQE9 MIR4646-201ENST00000580775 63 ntBASIC3.56□□□□□ -1.84
U3KQE9 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.56□□□□□ -1.84
U3KQE9 RPL17P51-201ENST00000605218 238 ntBASIC3.56□□□□□ -1.84
U3KQE9 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.56□□□□□ -1.84
U3KQE9 AC005086.4-201ENST00000623065 213 ntBASIC3.56□□□□□ -1.84
U3KQE9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
U3KQE9 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.56□□□□□ -1.84
U3KQE9 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
U3KQE9 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.56□□□□□ -1.84
U3KQE9 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
U3KQE9 AL133243.3-201ENST00000617415 3004 ntBASIC3.56□□□□□ -1.84
U3KQE9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
U3KQE9 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
U3KQE9 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
U3KQE9 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
U3KQE9 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
U3KQE9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
U3KQE9 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.55□□□□□ -1.84
U3KQE9 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.55□□□□□ -1.84
U3KQE9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.55□□□□□ -1.84
U3KQE9 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.55□□□□□ -1.84
U3KQE9 AL590240.1-201ENST00000334118 313 ntBASIC3.55□□□□□ -1.84
U3KQE9 RNU1-75P-201ENST00000347264 129 ntBASIC3.55□□□□□ -1.84
U3KQE9 RNU6-600P-201ENST00000362524 99 ntBASIC3.55□□□□□ -1.84
U3KQE9 U3.9-201ENST00000363823 204 ntBASIC3.55□□□□□ -1.84
U3KQE9 RNU6-1048P-201ENST00000364054 107 ntBASIC3.55□□□□□ -1.84
U3KQE9 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.55□□□□□ -1.84
U3KQE9 Y_RNA.393-201ENST00000383936 102 ntBASIC3.55□□□□□ -1.84
U3KQE9 U8.12-201ENST00000384701 133 ntBASIC3.55□□□□□ -1.84
U3KQE9 MIR549A-201ENST00000385268 96 ntBASIC3.55□□□□□ -1.84
U3KQE9 SNORD96B-201ENST00000386148 79 ntBASIC3.55□□□□□ -1.84
U3KQE9 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
U3KQE9 RNA5SP129-201ENST00000410276 118 ntBASIC3.55□□□□□ -1.84
U3KQE9 RPL21P126-201ENST00000470049 478 ntBASIC3.55□□□□□ -1.84
U3KQE9 CYCTP-201ENST00000504253 315 ntBASIC3.55□□□□□ -1.84
U3KQE9 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.55□□□□□ -1.84
U3KQE9 PDCD5P2-201ENST00000507570 312 ntBASIC3.55□□□□□ -1.84
U3KQE9 SCARNA8-201ENST00000515924 131 ntBASIC3.55□□□□□ -1.84
U3KQE9 RNA5SP464-201ENST00000516251 108 ntBASIC3.55□□□□□ -1.84
U3KQE9 Y_RNA.712-201ENST00000517011 92 ntBASIC3.55□□□□□ -1.84
U3KQE9 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms