| BACE2 | Q9Y5Z0 | DNAJC10-201 | ENST00000264065 | 20129 nt | APPRIS P1 TSL 1 (best) BASIC | 3.86 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | STAU2-207 | ENST00000519961 | 3928 nt | TSL 1 (best) BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | C6orf10-209 | ENST00000612031 | 2179 nt | APPRIS ALT2 TSL 5 BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | CCDC110-202 | ENST00000393540 | 2722 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | CLCA4-201 | ENST00000370563 | 3211 nt | APPRIS P1 TSL 1 (best) BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | RNU1-100P-201 | ENST00000365255 | 165 nt | BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | CRP-203 | ENST00000368111 | 512 nt | TSL 3 BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | RNU6-1093P-201 | ENST00000391194 | 107 nt | BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | AC092660.1-201 | ENST00000420648 | 371 nt | TSL 2 BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | TRAPPC2P4-201 | ENST00000421750 | 331 nt | BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | TMEM167AP1-201 | ENST00000423409 | 219 nt | BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | AL139397.1-201 | ENST00000430456 | 644 nt | TSL 2 BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | AC009296.1-201 | ENST00000443146 | 155 nt | BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | AL031659.1-201 | ENST00000447075 | 539 nt | BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | AL353705.4-201 | ENST00000449661 | 238 nt | BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | AC092162.2-204 | ENST00000451851 | 566 nt | TSL 4 BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | MTND4LP30-201 | ENST00000454092 | 297 nt | BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | HMGN2P16-201 | ENST00000456802 | 261 nt | BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | AC098869.1-201 | ENST00000481627 | 292 nt | BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | LINC02198-202 | ENST00000505371 | 526 nt | TSL 5 BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | AL356133.2-201 | ENST00000521572 | 371 nt | TSL 3 BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | AC093023.1-201 | ENST00000547375 | 507 nt | BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | AC090617.3-201 | ENST00000573670 | 475 nt | BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | AL161756.2-201 | ENST00000604597 | 246 nt | BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | AL110115.1-201 | ENST00000614396 | 364 nt | BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | AC141273.2-201 | ENST00000618989 | 130 nt | BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | MUCL1-205 | ENST00000619042 | 243 nt | APPRIS ALT2 TSL 5 BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | FOXP2-227 | ENST00000638397 | 240 nt | TSL 5 BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | WNK3-202 | ENST00000375159 | 5403 nt | APPRIS P3 TSL 1 (best) BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | GPRC6A-201 | ENST00000310357 | 2860 nt | APPRIS P1 TSL 1 (best) BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | AP001148.1-201 | ENST00000624124 | 2359 nt | BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | PTPN22-211 | ENST00000538253 | 3575 nt | TSL 1 (best) BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | AC018555.1-201 | ENST00000567548 | 1980 nt | BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | AC073346.2-201 | ENST00000624724 | 2058 nt | BASIC | 3.85 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | PPP1R9A-208 | ENST00000456331 | 10090 nt | TSL 1 (best) BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | KNTC1-201 | ENST00000333479 | 6975 nt | APPRIS P1 TSL 1 (best) BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | FRYL-205 | ENST00000503238 | 11103 nt | APPRIS P1 TSL 5 BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | DTWD1-201 | ENST00000251250 | 13776 nt | APPRIS P1 TSL 1 (best) BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | FAM208A-202 | ENST00000431842 | 7119 nt | TSL 1 (best) BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | TLR10-206 | ENST00000508334 | 2616 nt | APPRIS P1 TSL 1 (best) BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | FAM35DP-201 | ENST00000323387 | 2712 nt | BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | RNU6-222P-201 | ENST00000362438 | 107 nt | BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | RNA5SP50-201 | ENST00000363731 | 107 nt | BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.439-201 | ENST00000384119 | 94 nt | BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | SNORA9-201 | ENST00000384215 | 133 nt | BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | RNU2-25P-201 | ENST00000411041 | 191 nt | BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | NDUFS5P4-201 | ENST00000412983 | 318 nt | BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | EIF1AXP1-201 | ENST00000419267 | 435 nt | BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | AC139712.2-201 | ENST00000424302 | 339 nt | BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | AC069257.1-202 | ENST00000425275 | 422 nt | TSL 3 BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | BX679664.1-201 | ENST00000434429 | 253 nt | BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | AC125238.1-201 | ENST00000448842 | 249 nt | BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | RPL23AP75-201 | ENST00000491601 | 451 nt | BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | RPS27AP10-201 | ENST00000496103 | 208 nt | BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | AC026784.1-201 | ENST00000507986 | 352 nt | BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | AC091874.1-201 | ENST00000511402 | 339 nt | BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | RNU1-61P-201 | ENST00000516107 | 151 nt | BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.713-201 | ENST00000517013 | 96 nt | BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | AL360157.1-201 | ENST00000565962 | 87 nt | BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | LINC01195-201 | ENST00000570118 | 451 nt | TSL 3 BASIC | 3.84 | □□□□□ -1.79 | | |
| BACE2 | Q9Y5Z0 | ARAP2-210 | ENST00000618163 | 2592 nt | TSL 5 BASIC | 3.84 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | MACC1-205 | ENST00000589011 | 2686 nt | APPRIS P1 TSL 5 BASIC | 3.84 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | FEZ2-201 | ENST00000305852 | 1782 nt | TSL 5 BASIC | 3.84 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | AGL-206 | ENST00000370165 | 7106 nt | APPRIS P1 TSL 1 (best) BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | ZNF266-203 | ENST00000588933 | 3293 nt | APPRIS P1 TSL 1 (best) BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | MGA-211 | ENST00000570161 | 11859 nt | APPRIS P4 TSL 5 BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | SCEL-202 | ENST00000377246 | 3081 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | FIGNL1-202 | ENST00000395556 | 3485 nt | APPRIS P1 TSL 2 BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | LRRN3-203 | ENST00000422987 | 3513 nt | APPRIS P1 TSL 1 (best) BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | PKN2-AS1-202 | ENST00000458097 | 3542 nt | TSL 2 BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | ZNF483-201 | ENST00000309235 | 3655 nt | APPRIS P1 TSL 1 (best) BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | GABRG2-208 | ENST00000638552 | 3710 nt | TSL 5 BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | SNORD56.1-201 | ENST00000362913 | 68 nt | BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.84-201 | ENST00000363011 | 104 nt | BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | RNU1-140P-201 | ENST00000365040 | 165 nt | BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | RNU6-1286P-201 | ENST00000383871 | 107 nt | BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | RNU6-1035P-201 | ENST00000384477 | 107 nt | BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | RNVU1-14-201 | ENST00000384770 | 164 nt | BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | TRAV34-201 | ENST00000390461 | 349 nt | APPRIS P1 BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | AL138878.1-201 | ENST00000405131 | 347 nt | BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | MTHFD2P2-201 | ENST00000407725 | 247 nt | BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | MIR1183-201 | ENST00000408856 | 89 nt | BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | TEX41-209 | ENST00000451478 | 452 nt | TSL 2 BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | RPL30P1-201 | ENST00000488676 | 339 nt | BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | HMGB1P35-201 | ENST00000503360 | 598 nt | BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.673-201 | ENST00000516306 | 88 nt | BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | RNU6-928P-201 | ENST00000516876 | 104 nt | BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | RN7SKP209-201 | ENST00000516888 | 304 nt | BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | IGKV2-23-201 | ENST00000518729 | 323 nt | BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | OOSP2-203 | ENST00000532905 | 496 nt | APPRIS ALT2 TSL 3 BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | AC007375.1-201 | ENST00000554513 | 578 nt | BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | AC012433.1-201 | ENST00000588916 | 398 nt | BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | AC020914.4-201 | ENST00000597690 | 277 nt | BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | RPL23AP88-201 | ENST00000605759 | 454 nt | BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | LINC00310-206 | ENST00000609947 | 892 nt | TSL 5 BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | MIR376A1-201 | ENST00000616574 | 68 nt | BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | AC024581.2-201 | ENST00000619986 | 252 nt | BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | MFSD8-236 | ENST00000641509 | 4050 nt | BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | ATP2B1-202 | ENST00000359142 | 6977 nt | TSL 5 BASIC | 3.83 | □□□□□ -1.8 | | |
| BACE2 | Q9Y5Z0 | MBNL1-211 | ENST00000463374 | 5092 nt | APPRIS P4 TSL 1 (best) BASIC | 3.83 | □□□□□ -1.8 | | |