Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHA13Q9Y5I0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 Y_RNA.216-201ENST00000364205 93 ntBASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 RNU6-487P-201ENST00000365430 104 ntBASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 RNU6-843P-201ENST00000384454 104 ntBASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 AC096664.2-201ENST00000411843 406 ntBASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 MTND3P9-201ENST00000429526 346 ntBASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 AC009969.1-201ENST00000438726 172 ntBASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 AL161651.1-201ENST00000440882 223 ntBASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 AC243964.1-201ENST00000441814 261 ntBASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 AC007969.2-201ENST00000441891 191 ntBASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 RNU6-699P-201ENST00000517081 110 ntBASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 SNORA31.23-201ENST00000517219 133 ntBASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 AP000889.1-201ENST00000530968 660 ntBASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 CBX3P8-201ENST00000532412 525 ntBASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 AC006504.6-201ENST00000590142 199 ntBASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 AC024581.2-201ENST00000619986 252 ntBASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 Z83843.1-201ENST00000604070 3685 ntBASIC3.38□□□□□ -1.87
PCDHA13Q9Y5I0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 SNORD50.1-201ENST00000362987 71 ntBASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 RNU1-115P-201ENST00000365329 160 ntBASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 AC117470.1-201ENST00000381974 330 ntBASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 BTF3L4P2-201ENST00000392798 346 ntBASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 RNU6-1245P-201ENST00000411130 106 ntBASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 NUP35P1-201ENST00000422734 947 ntBASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 MED28P2-201ENST00000475771 317 ntBASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 FO393415.2-201ENST00000480085 343 ntBASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 RN7SL283P-201ENST00000489055 303 ntBASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 ACA59.2-201ENST00000517061 156 ntBASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 IGKV2-23-201ENST00000518729 323 ntBASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 AC005014.2-201ENST00000607795 599 ntBASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 AC241585.2-209ENST00000638217 143 ntBASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 MTND5P9-201ENST00000503854 1755 ntBASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 ZNF299P-201ENST00000406845 1804 ntBASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 MAPK10-322ENST00000641485 4530 ntBASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 AC004944.1-201ENST00000517807 3059 ntBASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHA13Q9Y5I0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 RNU6-595P-201ENST00000363944 107 ntBASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 SNORA14A-201ENST00000364773 135 ntBASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 Y_RNA.428-201ENST00000384078 102 ntBASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 Y_RNA.577-201ENST00000384794 101 ntBASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 RNA5SP390-201ENST00000410191 113 ntBASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 AC096649.2-201ENST00000416186 393 ntBASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 YME1L1P1-201ENST00000429435 297 ntBASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 AC099799.1-201ENST00000439809 192 ntBASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 MTND4P19-201ENST00000446659 478 ntBASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 RN7SKP43-201ENST00000516173 320 ntBASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 RN7SKP295-201ENST00000517264 153 ntBASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 AC026403.1-201ENST00000518938 295 ntBASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 CKS1BP7-201ENST00000522230 235 ntBASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 AC007458.1-201ENST00000542812 373 ntBASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 AC091152.3-201ENST00000604227 325 ntBASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 AC073657.2-201ENST00000605661 303 ntBASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 AC009318.2-201ENST00000610917 651 ntBASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHA13Q9Y5I0 AC008264.2-201ENST00000610193 3731 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 RNU6-858P-201ENST00000362436 107 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 RNY1P16-201ENST00000363063 111 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 RNU6-1032P-201ENST00000384100 107 ntBASIC3.35□□□□□ -1.87
PCDHA13Q9Y5I0 RNU6-738P-201ENST00000384531 106 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms