Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC007375.1-201ENST00000554513 578 ntBASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 SUB1P3-201ENST00000564581 315 ntBASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 AC137590.2-201ENST00000619709 240 ntBASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 AC007823.1-201ENST00000569932 1566 ntBASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 AL109809.4-201ENST00000603520 2185 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 Y_RNA.111-201ENST00000363248 100 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 Y_RNA.112-201ENST00000363250 102 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 RNU6-595P-201ENST00000363944 107 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 SNORD32A-201ENST00000364805 84 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 Y_RNA.445-201ENST00000384168 102 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 MIR559-201ENST00000385188 96 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 U3.26-201ENST00000391236 204 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 MIR548P-201ENST00000408336 84 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 RNU2-23P-201ENST00000410545 195 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 RNA5SP120-201ENST00000410900 112 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 AC096664.2-201ENST00000411843 406 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 NUP35P1-201ENST00000422734 947 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 AC004383.1-201ENST00000438135 289 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 AL031659.1-201ENST00000447075 539 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 AC022493.2-201ENST00000506122 481 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 SEM1P1-201ENST00000506694 209 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 SCARNA11.3-201ENST00000517276 130 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 MIR4738-201ENST00000579134 87 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 AL353621.2-201ENST00000605340 133 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 RMST_8.1-201ENST00000610287 165 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 RNVU1-4-201ENST00000612985 164 ntBASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHGA9Q9Y5G4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 SNORD50.1-201ENST00000362987 71 ntBASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 RNY1P16-201ENST00000363063 111 ntBASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 RNU6-283P-201ENST00000364788 107 ntBASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 RNU6-700P-201ENST00000391043 107 ntBASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 AL590004.1-201ENST00000405321 300 ntBASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 RPL21P10-201ENST00000463521 490 ntBASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 AC008155.2-201ENST00000464337 397 ntBASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 FO393415.2-201ENST00000480085 343 ntBASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 RPL36AP48-201ENST00000485521 314 ntBASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 AC090096.1-201ENST00000489168 390 ntBASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 AC022447.4-201ENST00000504053 364 ntBASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 RAC1P5-201ENST00000512182 576 ntBASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 RNU2-27P-201ENST00000516185 142 ntBASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 AC009812.2-201ENST00000517657 457 ntBASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 HSPE1P4-201ENST00000550617 308 ntBASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 AC006077.1-201ENST00000604746 343 ntBASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 HMGB1P24-202ENST00000615653 685 ntBASIC3.34□□□□□ -1.87
PCDHGA9Q9Y5G4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PCDHGA9Q9Y5G4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
PCDHGA9Q9Y5G4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PCDHGA9Q9Y5G4 AL359854.1-201ENST00000614203 1594 ntBASIC3.34□□□□□ -1.88
PCDHGA9Q9Y5G4 AC233981.2-201ENST00000611524 1614 ntBASIC3.33□□□□□ -1.88
PCDHGA9Q9Y5G4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHGA9Q9Y5G4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHGA9Q9Y5G4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHGA9Q9Y5G4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHGA9Q9Y5G4 MIR369-201ENST00000362155 70 ntBASIC3.33□□□□□ -1.88
PCDHGA9Q9Y5G4 Y_RNA.202-201ENST00000364083 110 ntBASIC3.33□□□□□ -1.88
PCDHGA9Q9Y5G4 Y_RNA.252-201ENST00000364556 101 ntBASIC3.33□□□□□ -1.88
PCDHGA9Q9Y5G4 RNU4-56P-201ENST00000364700 142 ntBASIC3.33□□□□□ -1.88
PCDHGA9Q9Y5G4 RNU6-968P-201ENST00000384076 107 ntBASIC3.33□□□□□ -1.88
PCDHGA9Q9Y5G4 Y_RNA.428-201ENST00000384078 102 ntBASIC3.33□□□□□ -1.88
PCDHGA9Q9Y5G4 Y_RNA.577-201ENST00000384794 101 ntBASIC3.33□□□□□ -1.88
PCDHGA9Q9Y5G4 SAR1AP2-201ENST00000392696 594 ntBASIC3.33□□□□□ -1.88
PCDHGA9Q9Y5G4 MTCYBP10-201ENST00000424905 650 ntBASIC3.33□□□□□ -1.88
PCDHGA9Q9Y5G4 TRIAP1P1-201ENST00000427062 225 ntBASIC3.33□□□□□ -1.88
PCDHGA9Q9Y5G4 AC005326.1-201ENST00000429197 123 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms