Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 Y_RNA.151-201ENST00000363566 112 ntBASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-306P-201ENST00000384617 107 ntBASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 MIR517A-201ENST00000385001 87 ntBASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 AL030996.1-201ENST00000411430 235 ntBASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 SNORD56-201ENST00000413522 71 ntBASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 USP9YP30-201ENST00000430729 455 ntBASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 MTATP6P7-201ENST00000453315 681 ntBASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 RPL12P25-201ENST00000455592 494 ntBASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 AC018437.1-201ENST00000492214 406 ntBASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-976P-201ENST00000516086 111 ntBASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-307P-201ENST00000516743 106 ntBASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 AC109479.2-201ENST00000517842 174 ntBASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 ELOCP31-201ENST00000540463 467 ntBASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 SNRPGP18-201ENST00000553000 214 ntBASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 MIR4782-201ENST00000577987 79 ntBASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 AC008121.1-201ENST00000603244 268 ntBASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 AC002076.2-201ENST00000617362 122 ntBASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
SSX2IPQ9Y2D8 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
SSX2IPQ9Y2D8 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 Y_RNA.112-201ENST00000363250 102 ntBASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-1040P-201ENST00000383974 107 ntBASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 MIR1289-1-201ENST00000408836 144 ntBASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 AC022018.1-201ENST00000430685 241 ntBASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 RPS15AP10-201ENST00000432472 382 ntBASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 AC244505.4-201ENST00000434905 287 ntBASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 DAP3P1-201ENST00000441522 278 ntBASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 SSXP5-201ENST00000443473 287 ntBASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 UBE2DNL-203ENST00000474922 222 ntBASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 RPL7P42-201ENST00000481005 679 ntBASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 AL163540.1-201ENST00000485382 386 ntBASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 Y_RNA.711-201ENST00000516993 102 ntBASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 HMGB1P14-201ENST00000557424 591 ntBASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 AC005899.2-201ENST00000584353 90 ntBASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 AC011494.1-201ENST00000596454 237 ntBASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 AC008962.1-201ENST00000605729 304 ntBASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 uc_338.22-201ENST00000622722 187 ntBASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 AL137790.1-201ENST00000634283 177 ntBASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SSX2IPQ9Y2D8 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 Y_RNA.132-201ENST00000363421 102 ntBASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 Y_RNA.404-201ENST00000383978 102 ntBASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-890P-201ENST00000384121 107 ntBASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-933P-201ENST00000384424 107 ntBASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 SNORA26.7-201ENST00000391288 122 ntBASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 SNORA75.6-201ENST00000391318 127 ntBASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 RPL26P27-201ENST00000414397 437 ntBASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 HMGN2P30-201ENST00000423237 256 ntBASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 USMG5P1-201ENST00000425964 177 ntBASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 AC093151.1-201ENST00000427711 313 ntBASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 AL137792.2-201ENST00000443484 235 ntBASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 AL031274.1-201ENST00000450334 232 ntBASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 AC008571.1-201ENST00000467232 300 ntBASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 RPL23AP45-201ENST00000476406 468 ntBASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 SMURF2P1-201ENST00000514992 481 ntBASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 AC009812.2-201ENST00000517657 457 ntBASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 AC022634.1-201ENST00000520765 532 ntBASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 TRAV32-201ENST00000553993 340 ntBASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 MTCO3P13-201ENST00000577757 781 ntBASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 AC006504.6-201ENST00000590142 199 ntBASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 U2.21-201ENST00000637295 81 ntBASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SSX2IPQ9Y2D8 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 Y_RNA.2-201ENST00000362330 96 ntBASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 SNORA5B-201ENST00000363786 132 ntBASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 U8.9-201ENST00000365667 134 ntBASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 Y_RNA.473-201ENST00000384333 102 ntBASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-1035P-201ENST00000384477 107 ntBASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-790P-201ENST00000384479 105 ntBASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 SNORA1.3-201ENST00000384676 136 ntBASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 MIR888-201ENST00000401186 77 ntBASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-1077P-201ENST00000410506 102 ntBASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms