Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.8□□□□□ -2.28
SCN8AQ9UQD0 RPS15AP10-201ENST00000432472 382 ntBASIC0.8□□□□□ -2.28
SCN8AQ9UQD0 USP9YP17-201ENST00000444617 696 ntBASIC0.8□□□□□ -2.28
SCN8AQ9UQD0 AC087477.1-201ENST00000465747 340 ntBASIC0.8□□□□□ -2.28
SCN8AQ9UQD0 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.8□□□□□ -2.28
SCN8AQ9UQD0 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.8□□□□□ -2.28
SCN8AQ9UQD0 AC174048.1-201ENST00000603389 144 ntBASIC0.8□□□□□ -2.28
SCN8AQ9UQD0 AC112191.3-201ENST00000604371 277 ntBASIC0.8□□□□□ -2.28
SCN8AQ9UQD0 AL022154.1-201ENST00000604698 785 ntBASIC0.8□□□□□ -2.28
SCN8AQ9UQD0 AC090517.3-201ENST00000625170 141 ntBASIC0.8□□□□□ -2.28
SCN8AQ9UQD0 RNU1-124P-201ENST00000363861 145 ntBASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 RNU6-487P-201ENST00000365430 104 ntBASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 FTH1P12-201ENST00000432137 551 ntBASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 MTCYBP42-201ENST00000444653 1130 ntBASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 AL353718.1-201ENST00000451028 517 ntBASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 RNU6-1028P-201ENST00000517164 93 ntBASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 AC087897.1-201ENST00000550134 156 ntBASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 MIR3937-201ENST00000580135 106 ntBASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 AC211469.2-201ENST00000605461 205 ntBASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 HSBP1P2-201ENST00000299671 229 ntBASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 CBX3P9-201ENST00000402326 552 ntBASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 SNORD116-28-201ENST00000516123 91 ntBASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 CYCSP23-201ENST00000519781 313 ntBASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 AP001981.2-201ENST00000603241 418 ntBASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 AP001485.1-201ENST00000604799 199 ntBASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 AL159153.1-201ENST00000619688 317 ntBASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 MIR6835-201ENST00000621552 64 ntBASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 AC008993.2-201ENST00000631744 806 ntBASIC0.79□□□□□ -2.28
SCN8AQ9UQD0 SNORD33-201ENST00000362761 85 ntBASIC0.78□□□□□ -2.28
SCN8AQ9UQD0 SNORD114-6-201ENST00000364393 72 ntBASIC0.78□□□□□ -2.28
SCN8AQ9UQD0 SNORA70.7-201ENST00000384159 133 ntBASIC0.78□□□□□ -2.28
SCN8AQ9UQD0 MIR936-201ENST00000401264 98 ntBASIC0.78□□□□□ -2.28
SCN8AQ9UQD0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.78□□□□□ -2.28
SCN8AQ9UQD0 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.78□□□□□ -2.28
SCN8AQ9UQD0 AL096829.2-201ENST00000446582 742 ntBASIC0.78□□□□□ -2.28
SCN8AQ9UQD0 MTCO2P25-201ENST00000447065 681 ntBASIC0.78□□□□□ -2.28
SCN8AQ9UQD0 PTENP1-201ENST00000447117 1215 ntBASIC0.78□□□□□ -2.28
SCN8AQ9UQD0 RNA5SP269-201ENST00000459032 137 ntBASIC0.78□□□□□ -2.28
SCN8AQ9UQD0 RPL30P1-201ENST00000488676 339 ntBASIC0.78□□□□□ -2.28
SCN8AQ9UQD0 HMGB1P28-201ENST00000507778 552 ntBASIC0.78□□□□□ -2.28
SCN8AQ9UQD0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.78□□□□□ -2.28
SCN8AQ9UQD0 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.78□□□□□ -2.28
SCN8AQ9UQD0 AC073410.2-201ENST00000603240 332 ntBASIC0.78□□□□□ -2.28
SCN8AQ9UQD0 AC013244.2-201ENST00000603396 103 ntBASIC0.78□□□□□ -2.28
SCN8AQ9UQD0 AC093788.1-201ENST00000609356 927 ntBASIC0.78□□□□□ -2.28
SCN8AQ9UQD0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
SCN8AQ9UQD0 AL589826.1-201ENST00000340697 249 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 snoU2_19.1-201ENST00000362361 80 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 RNU6-512P-201ENST00000364438 103 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 AC083875.1-201ENST00000419509 405 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 AL596276.1-201ENST00000434465 418 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 AL353752.1-201ENST00000454946 260 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 RPS26P55-201ENST00000471178 356 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 AC093259.1-201ENST00000509755 300 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 AC009646.1-201ENST00000510455 318 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 AC079395.1-201ENST00000510981 262 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 RNA5SP404-201ENST00000517118 132 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 LRRC6P1-201ENST00000532188 885 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 MIR3169-201ENST00000578032 83 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 RNU6-88P-201ENST00000606801 100 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 AC092574.1-201ENST00000609771 420 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 MIR3529-201ENST00000637713 78 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 RNU6-395P-201ENST00000365662 106 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 MIR19A-201ENST00000384878 82 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 MIR597-201ENST00000384968 97 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 POLR2J4-204ENST00000418424 324 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 AC139712.2-201ENST00000424302 339 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 UBE2D3P3-201ENST00000426992 425 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 TIMM9P1-201ENST00000436122 256 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 AL606517.1-201ENST00000446914 387 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 MTCO3P27-201ENST00000514397 196 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 NIFKP6-201ENST00000598115 845 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 HSPE1P19-201ENST00000603327 295 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 MIR8065-201ENST00000620577 100 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 AC130454.1-201ENST00000622948 401 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms