Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 U8.11-201ENST00000384699 133 ntBASIC5.05□□□□□ -1.6
ZC3H4Q9UPT8 U8.12-201ENST00000384701 133 ntBASIC5.05□□□□□ -1.6
ZC3H4Q9UPT8 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
ZC3H4Q9UPT8 RNU6-1154P-201ENST00000391001 104 ntBASIC5.05□□□□□ -1.6
ZC3H4Q9UPT8 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.05□□□□□ -1.6
ZC3H4Q9UPT8 RPL21P17-201ENST00000397467 475 ntBASIC5.05□□□□□ -1.6
ZC3H4Q9UPT8 AL357139.1-201ENST00000407792 426 ntBASIC5.05□□□□□ -1.6
ZC3H4Q9UPT8 RNU5E-9P-201ENST00000411164 104 ntBASIC5.05□□□□□ -1.6
ZC3H4Q9UPT8 OOSP1P1-201ENST00000423265 274 ntBASIC5.05□□□□□ -1.6
ZC3H4Q9UPT8 AC005042.3-201ENST00000453230 174 ntBASIC5.05□□□□□ -1.6
ZC3H4Q9UPT8 U8.18-201ENST00000459285 133 ntBASIC5.05□□□□□ -1.6
ZC3H4Q9UPT8 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.05□□□□□ -1.6
ZC3H4Q9UPT8 AC019159.1-201ENST00000605094 187 ntBASIC5.05□□□□□ -1.6
ZC3H4Q9UPT8 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
ZC3H4Q9UPT8 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ZC3H4Q9UPT8 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ZC3H4Q9UPT8 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ZC3H4Q9UPT8 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
ZC3H4Q9UPT8 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
ZC3H4Q9UPT8 AL049781.1-201ENST00000623195 3585 ntBASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 SNORA60-201ENST00000362396 134 ntBASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 Y_RNA.81-201ENST00000362997 102 ntBASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 RNU6-942P-201ENST00000363002 107 ntBASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 RNU1-63P-201ENST00000383902 164 ntBASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 RNU6-1145P-201ENST00000384246 107 ntBASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 AL160275.2-201ENST00000412010 394 ntBASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 AC010095.1-201ENST00000443543 144 ntBASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 RPL23AP14-201ENST00000468281 468 ntBASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 PPIAP15-201ENST00000479662 484 ntBASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 AC140059.1-201ENST00000489238 361 ntBASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 RNU5F-8P-201ENST00000515941 111 ntBASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 RNU6-1198P-201ENST00000516904 67 ntBASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 U3.45-201ENST00000607547 219 ntBASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 MIR7975-201ENST00000619350 68 ntBASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
ZC3H4Q9UPT8 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 FTLP6-201ENST00000355274 422 ntBASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 RNU6-1027P-201ENST00000383998 107 ntBASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 SNORA36A-201ENST00000384221 132 ntBASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 MIR544A-201ENST00000384855 91 ntBASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 HDGFP1-201ENST00000405943 252 ntBASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 Y_RNA.595-201ENST00000410403 105 ntBASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 RNU6-735P-201ENST00000410612 107 ntBASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 HSPE1P12-201ENST00000412576 301 ntBASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 Z74021.1-201ENST00000423610 407 ntBASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 snoU13.6-201ENST00000458785 104 ntBASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 HMGB3P3-201ENST00000510526 400 ntBASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 AC022655.2-201ENST00000577280 318 ntBASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 MIR3145-201ENST00000580727 82 ntBASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 AL357075.2-201ENST00000614906 189 ntBASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 MIR7154-201ENST00000620673 73 ntBASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 PCNP-208ENST00000627393 136 ntTSL 2 BASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
ZC3H4Q9UPT8 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 RNU4-80P-201ENST00000363200 141 ntBASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 MIR186-201ENST00000384988 86 ntBASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 MIR518D-201ENST00000385014 87 ntBASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 HMGN2P30-201ENST00000423237 256 ntBASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 IFNA11P-201ENST00000446352 526 ntBASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 RPL37P4-201ENST00000448908 268 ntBASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 RNU6-703P-201ENST00000516946 107 ntBASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 AC006064.5-201ENST00000541782 248 ntBASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 MARK2P15-201ENST00000432204 2186 ntBASIC5.02□□□□□ -1.61
ZC3H4Q9UPT8 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms