Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC104136.1-201ENST00000512969 394 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AGGF1P4-201ENST00000568249 801 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AC099842.1-201ENST00000619919 596 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AC100810.6-201ENST00000638068 285 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 MIR340-201ENST00000362125 95 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 RNU6-1024P-201ENST00000384199 107 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 RNU6-1077P-201ENST00000410506 102 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 FCF1P4-201ENST00000448326 183 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 Y_RNA.648-201ENST00000459455 110 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AL049737.1-201ENST00000413920 1403 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AL354685.2-201ENST00000448218 1447 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 RNU2-3P-201ENST00000410144 191 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 RPS27AP14-201ENST00000422868 454 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC0.21□□□□□ -2.38
MACF1Q9UPN3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AC243960.4-201ENST00000600532 288 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AC012065.4-201ENST00000602445 679 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AC133794.1-201ENST00000602731 914 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 RNU6-655P-201ENST00000362858 107 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 RNU6-1120P-201ENST00000362988 108 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 Y_RNA.283-201ENST00000364798 112 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 SNORD115-26-201ENST00000365067 82 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 MIR153-1-201ENST00000384914 90 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AL136372.1-201ENST00000403060 228 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 MTND2P4-201ENST00000445034 1004 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 NF1P3-201ENST00000457709 450 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AP003034.1-201ENST00000534621 422 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.2□□□□□ -2.38
MACF1Q9UPN3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AL596245.1-201ENST00000618994 362 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC0.2□□□□□ -2.38
MACF1Q9UPN3 MTCYBP42-201ENST00000444653 1130 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 SCARNA16.2-201ENST00000516520 172 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 CYCSP27-201ENST00000527643 293 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AP003122.4-201ENST00000530980 758 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AC012435.1-202ENST00000568772 240 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 MIR3123-201ENST00000583417 75 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.2□□□□□ -2.38
MACF1Q9UPN3 MIR412-201ENST00000362142 91 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 Y_RNA.63-201ENST00000362841 102 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 U8.3-201ENST00000363321 132 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 Y_RNA.329-201ENST00000365209 107 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AC114737.2-201ENST00000421583 173 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.2□□□□□ -2.38
MACF1Q9UPN3 RNA5SP364-201ENST00000516938 78 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.2□□□□□ -2.38
MACF1Q9UPN3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.2□□□□□ -2.38
MACF1Q9UPN3 MIR4770-201ENST00000579149 58 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 MIR3165-201ENST00000579874 75 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AC020658.4-201ENST00000613987 684 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AC009318.4-201ENST00000620496 486 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC0.2□□□□□ -2.38
MACF1Q9UPN3 Y_RNA.46-201ENST00000362695 102 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 Y_RNA.125-201ENST00000363371 111 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 RNU6-792P-201ENST00000363490 107 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 RNU4-48P-201ENST00000365559 182 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
MACF1Q9UPN3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.2□□□□□ -2.38
MACF1Q9UPN3 RPS26P5-201ENST00000418544 335 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 RPL7P31-201ENST00000450192 724 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AC023442.1-201ENST00000531247 422 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AC008962.1-201ENST00000605729 304 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AC009950.2-201ENST00000636548 183 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 MIR6866-201ENST00000638146 69 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
MACF1Q9UPN3 RNU6-1210P-201ENST00000363775 107 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 RNU1-141P-201ENST00000364623 158 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 BX248409.1-201ENST00000455497 255 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 RN7SKP12-201ENST00000516275 143 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 RNU6-412P-201ENST00000516434 106 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AC115085.1-201ENST00000588924 229 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AL359880.1-201ENST00000621879 266 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 MIR424-201ENST00000362227 98 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 Y_RNA.476-201ENST00000384347 108 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 Y_RNA.569-201ENST00000384749 103 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.2□□□□□ -2.38
MACF1Q9UPN3 RAC1P6-201ENST00000423911 575 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 SCARNA18-201ENST00000459004 134 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AP005597.4-201ENST00000526762 229 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AL109918.3-201ENST00000603072 338 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 AC080013.3-201ENST00000606839 578 ntBASIC0.2□□□□□ -2.38
MACF1Q9UPN3 RNU6-432P-201ENST00000384196 109 ntBASIC0.19□□□□□ -2.38
MACF1Q9UPN3 SNORA2B-201ENST00000384583 137 ntBASIC0.19□□□□□ -2.38
MACF1Q9UPN3 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.19□□□□□ -2.38
MACF1Q9UPN3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.19□□□□□ -2.38
MACF1Q9UPN3 HSFY7P-201ENST00000432672 318 ntBASIC0.19□□□□□ -2.38
MACF1Q9UPN3 HSFY8P-201ENST00000437934 318 ntBASIC0.19□□□□□ -2.38
MACF1Q9UPN3 RSL24D1P2-201ENST00000445584 366 ntBASIC0.19□□□□□ -2.38
MACF1Q9UPN3 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms