Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 LINC02471-203ENST00000641941 4752 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 Y_RNA.8-201ENST00000362353 102 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 Y_RNA.304-201ENST00000365011 112 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 RNU6-1181P-201ENST00000384191 106 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 RNU6-1145P-201ENST00000384246 107 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 RNU6-1035P-201ENST00000384477 107 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 RNU6-140P-201ENST00000384566 108 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 RNU6-159P-201ENST00000391080 106 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 RPL21P65-201ENST00000406094 466 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 MTHFD2P2-201ENST00000407725 247 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 RNA5SP317-201ENST00000410176 116 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 RNA5SP311-201ENST00000411290 116 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 AL691449.1-201ENST00000426570 421 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 WARS2P1-201ENST00000429678 537 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 TBCAP1-201ENST00000436520 327 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 HMGN2P21-201ENST00000447764 270 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 UQCRBP2-201ENST00000447827 297 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 MTATP6P7-201ENST00000453315 681 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 AL645939.1-201ENST00000453429 797 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 RPL23AP14-201ENST00000468281 468 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 SNORA40.9-201ENST00000515895 93 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 RNY3P16-201ENST00000516338 101 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 RNA5SP315-201ENST00000516340 116 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 RNA5SP312-201ENST00000517068 116 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 MIR5571-201ENST00000577998 113 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 AC073349.3-201ENST00000617616 186 ntBASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
AP4E1Q9UPM8 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.12□□□□□ -1.75
AP4E1Q9UPM8 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
AP4E1Q9UPM8 FTLP6-201ENST00000355274 422 ntBASIC4.12□□□□□ -1.75
AP4E1Q9UPM8 RNU6-137P-201ENST00000363680 108 ntBASIC4.12□□□□□ -1.75
AP4E1Q9UPM8 RNU6-658P-201ENST00000384606 106 ntBASIC4.12□□□□□ -1.75
AP4E1Q9UPM8 RNU6-541P-201ENST00000384709 110 ntBASIC4.12□□□□□ -1.75
AP4E1Q9UPM8 MIR325-201ENST00000385260 98 ntBASIC4.12□□□□□ -1.75
AP4E1Q9UPM8 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
AP4E1Q9UPM8 S100A11P1-201ENST00000477525 312 ntBASIC4.12□□□□□ -1.75
AP4E1Q9UPM8 AC074133.1-201ENST00000515696 183 ntBASIC4.12□□□□□ -1.75
AP4E1Q9UPM8 Vault.1-201ENST00000516474 102 ntBASIC4.12□□□□□ -1.75
AP4E1Q9UPM8 LINC00933-203ENST00000559812 219 ntBASIC4.12□□□□□ -1.75
AP4E1Q9UPM8 AC136624.4-201ENST00000573044 370 ntBASIC4.12□□□□□ -1.75
AP4E1Q9UPM8 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.12□□□□□ -1.75
AP4E1Q9UPM8 AC108706.1-201ENST00000611053 297 ntBASIC4.12□□□□□ -1.75
AP4E1Q9UPM8 AC112484.5-201ENST00000624189 228 ntBASIC4.12□□□□□ -1.75
AP4E1Q9UPM8 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.12□□□□□ -1.75
AP4E1Q9UPM8 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.12□□□□□ -1.75
AP4E1Q9UPM8 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
AP4E1Q9UPM8 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 RNU6-778P-201ENST00000363269 103 ntBASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 U3.19-201ENST00000390893 196 ntBASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 HLFP1-201ENST00000402375 499 ntBASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 POLR2KP2-201ENST00000438155 177 ntBASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 AC083863.1-201ENST00000438811 231 ntBASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 HMGB1P37-201ENST00000439613 609 ntBASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 AC007969.2-201ENST00000441891 191 ntBASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 AC009237.7-201ENST00000447357 229 ntBASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 RNU6-58P-201ENST00000517143 103 ntBASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 RNA5SP179-201ENST00000517284 121 ntBASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 AC025946.2-201ENST00000603398 234 ntBASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 AC091167.4-201ENST00000605079 184 ntBASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 AC024581.2-201ENST00000619986 252 ntBASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.11□□□□□ -1.75
AP4E1Q9UPM8 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
AP4E1Q9UPM8 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
AP4E1Q9UPM8 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
AP4E1Q9UPM8 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
AP4E1Q9UPM8 SNORD115-8-201ENST00000363856 82 ntBASIC4.1□□□□□ -1.75
AP4E1Q9UPM8 Y_RNA.217-201ENST00000364214 105 ntBASIC4.1□□□□□ -1.75
AP4E1Q9UPM8 SNORA70.2-201ENST00000364506 135 ntBASIC4.1□□□□□ -1.75
AP4E1Q9UPM8 SNORD115-38-201ENST00000365037 82 ntBASIC4.1□□□□□ -1.75
AP4E1Q9UPM8 RNU1-140P-201ENST00000365040 165 ntBASIC4.1□□□□□ -1.75
AP4E1Q9UPM8 Y_RNA.308-201ENST00000365043 101 ntBASIC4.1□□□□□ -1.75
AP4E1Q9UPM8 Y_RNA.331-201ENST00000365267 102 ntBASIC4.1□□□□□ -1.75
AP4E1Q9UPM8 Y_RNA.441-201ENST00000384123 112 ntBASIC4.1□□□□□ -1.75
AP4E1Q9UPM8 RNU6-217P-201ENST00000384164 104 ntBASIC4.1□□□□□ -1.75
AP4E1Q9UPM8 RNU1-13P-201ENST00000384499 162 ntBASIC4.1□□□□□ -1.75
AP4E1Q9UPM8 SNORD116-20-201ENST00000384529 92 ntBASIC4.1□□□□□ -1.75
AP4E1Q9UPM8 RNU5E-9P-201ENST00000411164 104 ntBASIC4.1□□□□□ -1.75
AP4E1Q9UPM8 OOSP1P1-201ENST00000423265 274 ntBASIC4.1□□□□□ -1.75
AP4E1Q9UPM8 AC092017.2-201ENST00000427600 362 ntBASIC4.1□□□□□ -1.75
AP4E1Q9UPM8 Y_RNA.641-201ENST00000459414 105 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms