Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 RNU6-622P-201ENST00000384272 103 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 MIR186-201ENST00000384988 86 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 MIR95-201ENST00000385072 81 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 U8.13-201ENST00000390842 128 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 RNU2-3P-201ENST00000410144 191 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 RNU6-1140P-201ENST00000410517 106 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 OR9R1P-201ENST00000412200 877 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 AC027124.2-201ENST00000428249 105 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 MTCO2P11-201ENST00000431069 680 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 MTND4P32-201ENST00000437189 1237 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 USP9YP8-201ENST00000441913 500 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 snoU13.23-201ENST00000458863 104 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 AP001025.1-201ENST00000486139 332 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 AC068781.1-201ENST00000488231 618 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 AC010493.1-201ENST00000513479 292 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 LRRC34P2-201ENST00000514850 553 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 RNU2-53P-201ENST00000516257 147 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 AL138976.2-201ENST00000563989 694 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 MIR4703-201ENST00000577728 79 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 RPL30P11-203ENST00000598995 310 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 AL713866.2-201ENST00000603579 219 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 AC098614.4-201ENST00000607601 462 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 AL031601.2-202ENST00000622650 282 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 AL356292.1-201ENST00000283110 373 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 RNU6-1120P-201ENST00000362988 108 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 RNU5E-7P-201ENST00000365290 117 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 RNA5SP37-201ENST00000365420 130 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 SNORA75-201ENST00000384158 137 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 MIR764-201ENST00000390811 85 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 AL355497.1-201ENST00000406262 551 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 U3.40-201ENST00000408706 208 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 RNU2-9P-201ENST00000410194 145 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 CYCSP33-201ENST00000414485 327 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 AC008267.5-201ENST00000424928 265 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 SRIP2-201ENST00000428470 166 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 AC009238.1-201ENST00000442165 424 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 IFNA11P-201ENST00000446352 526 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 AC009237.6-201ENST00000446969 424 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 RPL31P3-201ENST00000458430 332 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 AC079382.1-201ENST00000493346 557 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 MTND2P38-201ENST00000522536 667 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 DEFB122-202ENST00000569013 197 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 AC090897.2-201ENST00000581715 130 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 AC110760.3-201ENST00000598794 467 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 AC119751.7-201ENST00000600494 245 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 AC091834.1-201ENST00000614543 472 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 AP000553.5-201ENST00000641933 54 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 AC002543.1-201ENST00000299783 1954 ntBASIC1.76□□□□□ -2.13
CLCF1Q9UBD9 RNU6-78P-201ENST00000362897 107 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 SNORD56.1-201ENST00000362913 68 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 RNU6-529P-201ENST00000363383 104 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 SNORA3A-201ENST00000364113 130 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 Y_RNA.324-201ENST00000365165 102 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 RNU1-148P-201ENST00000384472 162 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 Y_RNA.553-201ENST00000384670 102 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 MIR561-201ENST00000385216 97 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 AC019129.1-201ENST00000403786 261 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 RNU2-29P-201ENST00000410423 189 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 RNU2-23P-201ENST00000410545 195 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 MTATP6P18-201ENST00000417994 673 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 AL669831.1-202ENST00000428504 417 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 AL591806.2-201ENST00000433122 173 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 GTF2IP13-201ENST00000438487 386 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 FTH1P25-201ENST00000447665 469 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 RPL23AP42-201ENST00000471152 471 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 RPS27P21-201ENST00000486977 252 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 MTCO3P9-201ENST00000506989 781 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 AC116337.1-201ENST00000509680 687 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 AC105417.1-201ENST00000514691 285 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 RN7SKP298-201ENST00000515950 94 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms