Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RNU5F-8P-201ENST00000515941 111 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 RNU6-559P-201ENST00000516151 98 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 RNU6-1016P-201ENST00000516689 94 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.26□□□□□ -1.89
COL20A1Q9P218 TRAV32-201ENST00000553993 340 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 AC103996.1-201ENST00000555468 102 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 AC010653.1-201ENST00000571108 881 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 MIR4319-201ENST00000577285 85 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.26□□□□□ -1.89
COL20A1Q9P218 ELOCP29-201ENST00000588193 334 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 AL355877.2-201ENST00000603670 358 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COL20A1Q9P218 AC019193.3-201ENST00000609144 554 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 AL161423.1-201ENST00000613700 262 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 AC091564.4-201ENST00000533934 2194 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL20A1Q9P218 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL20A1Q9P218 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL20A1Q9P218 MTND4P23-201ENST00000447723 1363 ntBASIC3.25□□□□□ -1.89
COL20A1Q9P218 AC103988.1-201ENST00000566382 2177 ntBASIC3.25□□□□□ -1.89
COL20A1Q9P218 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL20A1Q9P218 RPL9P7-201ENST00000330965 580 ntBASIC3.25□□□□□ -1.89
COL20A1Q9P218 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.25□□□□□ -1.89
COL20A1Q9P218 RNU4-79P-201ENST00000362764 141 ntBASIC3.25□□□□□ -1.89
COL20A1Q9P218 RNU6-105P-201ENST00000363909 104 ntBASIC3.25□□□□□ -1.89
COL20A1Q9P218 RNU6-1027P-201ENST00000383998 107 ntBASIC3.25□□□□□ -1.89
COL20A1Q9P218 Y_RNA.500-201ENST00000384466 111 ntBASIC3.25□□□□□ -1.89
COL20A1Q9P218 RNU6-790P-201ENST00000384479 105 ntBASIC3.25□□□□□ -1.89
COL20A1Q9P218 RNU6-748P-201ENST00000384648 107 ntBASIC3.25□□□□□ -1.89
COL20A1Q9P218 RPS29P13-201ENST00000402041 169 ntBASIC3.25□□□□□ -1.89
COL20A1Q9P218 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL20A1Q9P218 AL513043.1-201ENST00000439124 535 ntBASIC3.25□□□□□ -1.89
COL20A1Q9P218 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.25□□□□□ -1.89
COL20A1Q9P218 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.25□□□□□ -1.89
COL20A1Q9P218 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.25□□□□□ -1.89
COL20A1Q9P218 RNU7-187P-201ENST00000458985 68 ntBASIC3.25□□□□□ -1.89
COL20A1Q9P218 RPL9P9-202ENST00000466501 579 ntBASIC3.25□□□□□ -1.89
COL20A1Q9P218 AC133134.1-201ENST00000466800 359 ntBASIC3.25□□□□□ -1.89
COL20A1Q9P218 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.25□□□□□ -1.89
COL20A1Q9P218 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.25□□□□□ -1.89
COL20A1Q9P218 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.25□□□□□ -1.89
COL20A1Q9P218 MIR4719-201ENST00000585233 84 ntBASIC3.25□□□□□ -1.89
COL20A1Q9P218 BNIP3P16-201ENST00000589779 534 ntBASIC3.25□□□□□ -1.89
COL20A1Q9P218 AC018889.1-201ENST00000605372 397 ntBASIC3.25□□□□□ -1.89
COL20A1Q9P218 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.25□□□□□ -1.89
COL20A1Q9P218 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
COL20A1Q9P218 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.25□□□□□ -1.89
COL20A1Q9P218 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
COL20A1Q9P218 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.24□□□□□ -1.89
COL20A1Q9P218 AC062016.1-201ENST00000355719 319 ntBASIC3.24□□□□□ -1.89
COL20A1Q9P218 Y_RNA.67-201ENST00000362870 100 ntBASIC3.24□□□□□ -1.89
COL20A1Q9P218 RNU6-428P-201ENST00000362942 107 ntBASIC3.24□□□□□ -1.89
COL20A1Q9P218 RNU1-112P-201ENST00000364401 164 ntBASIC3.24□□□□□ -1.89
COL20A1Q9P218 Y_RNA.535-201ENST00000384612 99 ntBASIC3.24□□□□□ -1.89
COL20A1Q9P218 RNU6-325P-201ENST00000411132 105 ntBASIC3.24□□□□□ -1.89
COL20A1Q9P218 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.24□□□□□ -1.89
COL20A1Q9P218 MTCO2P27-201ENST00000420740 428 ntBASIC3.24□□□□□ -1.89
COL20A1Q9P218 AC087499.2-201ENST00000432861 149 ntBASIC3.24□□□□□ -1.89
COL20A1Q9P218 DAP3P1-201ENST00000441522 278 ntBASIC3.24□□□□□ -1.89
COL20A1Q9P218 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.24□□□□□ -1.89
COL20A1Q9P218 AC010265.1-201ENST00000513509 211 ntBASIC3.24□□□□□ -1.89
COL20A1Q9P218 AC093027.1-201ENST00000546698 429 ntBASIC3.24□□□□□ -1.89
COL20A1Q9P218 MIR5690-201ENST00000583739 73 ntBASIC3.24□□□□□ -1.89
COL20A1Q9P218 RPL12P50-201ENST00000603116 116 ntBASIC3.24□□□□□ -1.89
COL20A1Q9P218 AC091152.3-201ENST00000604227 325 ntBASIC3.24□□□□□ -1.89
COL20A1Q9P218 AC005046.1-201ENST00000608515 625 ntBASIC3.24□□□□□ -1.89
COL20A1Q9P218 AC024581.2-201ENST00000619986 252 ntBASIC3.24□□□□□ -1.89
COL20A1Q9P218 AC110774.1-201ENST00000623567 2018 ntBASIC3.24□□□□□ -1.89
COL20A1Q9P218 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COL20A1Q9P218 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COL20A1Q9P218 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.23□□□□□ -1.89
COL20A1Q9P218 RNU6-336P-201ENST00000364891 107 ntBASIC3.23□□□□□ -1.89
COL20A1Q9P218 Y_RNA.431-201ENST00000384086 102 ntBASIC3.23□□□□□ -1.89
COL20A1Q9P218 MIR517A-201ENST00000385001 87 ntBASIC3.23□□□□□ -1.89
COL20A1Q9P218 SNORA11.2-201ENST00000408318 127 ntBASIC3.23□□□□□ -1.89
COL20A1Q9P218 AC074117.2-201ENST00000417130 397 ntBASIC3.23□□□□□ -1.89
COL20A1Q9P218 AL139281.1-201ENST00000422120 335 ntBASIC3.23□□□□□ -1.89
COL20A1Q9P218 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.23□□□□□ -1.89
COL20A1Q9P218 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.23□□□□□ -1.89
COL20A1Q9P218 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.23□□□□□ -1.89
COL20A1Q9P218 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.23□□□□□ -1.89
COL20A1Q9P218 RPS27P26-201ENST00000494583 239 ntBASIC3.23□□□□□ -1.89
COL20A1Q9P218 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.23□□□□□ -1.89
COL20A1Q9P218 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.23□□□□□ -1.89
COL20A1Q9P218 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.23□□□□□ -1.89
COL20A1Q9P218 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.23□□□□□ -1.89
COL20A1Q9P218 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.23□□□□□ -1.89
COL20A1Q9P218 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL20A1Q9P218 AL391813.1-201ENST00000603098 260 ntBASIC3.23□□□□□ -1.89
COL20A1Q9P218 AL133215.3-201ENST00000609801 448 ntBASIC3.23□□□□□ -1.89
COL20A1Q9P218 PISRT1.1-201ENST00000616930 107 ntBASIC3.23□□□□□ -1.89
COL20A1Q9P218 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.23□□□□□ -1.89
COL20A1Q9P218 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.23□□□□□ -1.89
COL20A1Q9P218 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
COL20A1Q9P218 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.23□□□□□ -1.89
COL20A1Q9P218 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL20A1Q9P218 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL20A1Q9P218 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms