Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 MEMO1P3-201ENST00000459811 302 ntBASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 RPL30P6-201ENST00000475925 342 ntBASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 AC005832.3-201ENST00000537929 631 ntBASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 AC136619.2-201ENST00000563361 631 ntBASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 uc_338.15-201ENST00000615470 191 ntBASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 FARSBP1-201ENST00000435808 1778 ntBASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
PHRF1Q9P1Y6 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 RNU6-1284P-201ENST00000363701 100 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 RNU6-1222P-201ENST00000384615 107 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 MIR518D-201ENST00000385014 87 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 AC138623.1-201ENST00000418060 216 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 RPL17P35-201ENST00000432217 549 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 AC092001.1-201ENST00000453012 261 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 AC244505.3-201ENST00000454598 187 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 RAB11AP2-201ENST00000545905 639 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 AL512347.1-201ENST00000566420 503 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 MIR5708-201ENST00000579723 85 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 AC013470.4-201ENST00000619978 986 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 AC007792.1-201ENST00000623023 402 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 AC100821.1-201ENST00000523153 2479 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 AC092125.1-201ENST00000562568 1995 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 RNU1-23P-201ENST00000363361 144 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 RNU6-560P-201ENST00000364007 108 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 Y_RNA.280-201ENST00000364765 112 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 RNA5SP501-201ENST00000410990 112 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 PIGPP2-201ENST00000411569 458 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 AC008267.5-201ENST00000424928 265 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 HMGN2P9-201ENST00000476875 229 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 RNU6-902P-201ENST00000517212 91 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 AC104072.1-201ENST00000568817 668 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 AL078604.3-201ENST00000615580 211 ntBASIC0.71□□□□□ -2.3
PHRF1Q9P1Y6 AL589826.1-201ENST00000340697 249 ntBASIC0.7□□□□□ -2.3
PHRF1Q9P1Y6 Y_RNA.274-201ENST00000364714 101 ntBASIC0.7□□□□□ -2.3
PHRF1Q9P1Y6 RNU6-338P-201ENST00000383888 105 ntBASIC0.7□□□□□ -2.3
PHRF1Q9P1Y6 RNU6-622P-201ENST00000384272 103 ntBASIC0.7□□□□□ -2.3
PHRF1Q9P1Y6 RNA5SP390-201ENST00000410191 113 ntBASIC0.7□□□□□ -2.3
PHRF1Q9P1Y6 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.7□□□□□ -2.3
PHRF1Q9P1Y6 AC005094.1-201ENST00000440420 368 ntBASIC0.7□□□□□ -2.3
PHRF1Q9P1Y6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.7□□□□□ -2.3
PHRF1Q9P1Y6 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.7□□□□□ -2.3
PHRF1Q9P1Y6 ZNF886P-201ENST00000450781 723 ntBASIC0.7□□□□□ -2.3
PHRF1Q9P1Y6 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.7□□□□□ -2.3
PHRF1Q9P1Y6 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.7□□□□□ -2.3
PHRF1Q9P1Y6 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.7□□□□□ -2.3
PHRF1Q9P1Y6 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.7□□□□□ -2.3
PHRF1Q9P1Y6 AC079140.2-201ENST00000506193 142 ntBASIC0.7□□□□□ -2.3
PHRF1Q9P1Y6 RNU2-53P-201ENST00000516257 147 ntBASIC0.7□□□□□ -2.3
PHRF1Q9P1Y6 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.7□□□□□ -2.3
PHRF1Q9P1Y6 AC023538.1-201ENST00000534576 736 ntBASIC0.7□□□□□ -2.3
PHRF1Q9P1Y6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.7□□□□□ -2.3
PHRF1Q9P1Y6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.7□□□□□ -2.3
PHRF1Q9P1Y6 AC023932.2-201ENST00000603176 175 ntBASIC0.7□□□□□ -2.3
PHRF1Q9P1Y6 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 RNU6-512P-201ENST00000364438 103 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 RNU6-343P-201ENST00000364709 104 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 SNORD14D-201ENST00000384390 87 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 MIR515-2-201ENST00000384883 83 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 MIR515-1-201ENST00000384884 83 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 RNA5SP100-201ENST00000410903 110 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 RNA5SP59-201ENST00000410922 110 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 AC104651.1-201ENST00000427559 735 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 snoU13.9-201ENST00000458927 103 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 AC104563.1-201ENST00000476147 376 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 RNU6-1225P-201ENST00000516336 65 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 RN7SKP256-201ENST00000517201 314 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 DEFB130C-202ENST00000530001 230 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 AL133153.1-201ENST00000557756 303 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms