Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 RN7SKP27-201ENST00000410684 333 ntBASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 RPS29P4-201ENST00000414733 161 ntBASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 AC236972.2-201ENST00000434979 310 ntBASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 RPS26P21-201ENST00000475397 348 ntBASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 RPL21P129-201ENST00000491732 478 ntBASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 SNORA64.4-201ENST00000516632 81 ntBASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 MIR2276-201ENST00000516886 89 ntBASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 COX6CP5-201ENST00000527162 228 ntBASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 AC007375.1-201ENST00000554513 578 ntBASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 MIR3199-1-201ENST00000582434 88 ntBASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 AC008739.3-201ENST00000603262 127 ntBASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 AL359314.1-201ENST00000616913 261 ntBASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 AC073476.4-201ENST00000628409 72 ntBASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LIN7CQ9NUP9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 RNU6-310P-201ENST00000384655 107 ntBASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 RNU6-331P-201ENST00000384724 107 ntBASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 MIR449B-201ENST00000384995 97 ntBASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 RNY4P36-201ENST00000391116 96 ntBASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 MTCYBP4-201ENST00000401524 249 ntBASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 Y_RNA.646-201ENST00000410980 101 ntBASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 MTCO2P27-201ENST00000420740 428 ntBASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 BX276092.3-201ENST00000424182 230 ntBASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 RPS15AP7-201ENST00000439294 405 ntBASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 RPL30P15-201ENST00000457129 321 ntBASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 AC104564.1-201ENST00000493028 407 ntBASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 RNA5SP384-201ENST00000516615 116 ntBASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 MRPS36P4-201ENST00000534436 298 ntBASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 BNIP3P22-201ENST00000593399 556 ntBASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 U3.45-201ENST00000607547 219 ntBASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 AC135507.2-201ENST00000612443 309 ntBASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 HMGB1P24-202ENST00000615653 685 ntBASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 U4.6-201ENST00000621618 127 ntBASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 SNORA43.4-201ENST00000629559 138 ntBASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
LIN7CQ9NUP9 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 MTND5P19-201ENST00000424872 1794 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 MTND5P9-201ENST00000503854 1755 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 AC138915.1-201ENST00000565427 1685 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 Y_RNA.48-201ENST00000362710 103 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 Y_RNA.535-201ENST00000384612 99 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 RNA5SP293-201ENST00000410527 113 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 RN7SKP61-201ENST00000410642 295 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 CYCSP48-201ENST00000417124 323 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 EIF4EP2-201ENST00000422816 654 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 EIF4EP4-201ENST00000424916 578 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 AC008267.5-201ENST00000424928 265 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 USMG5P1-201ENST00000425964 177 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 AC078809.1-201ENST00000427601 140 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 SAR1AP4-201ENST00000429225 591 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 RPL30P4-201ENST00000429309 333 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 MICF-203ENST00000432679 129 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 RPL23AP22-201ENST00000437556 453 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 AC079354.2-201ENST00000453523 154 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 MTCO3P10-201ENST00000455912 772 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 Y_RNA.653-201ENST00000459091 95 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 snoU13.14-201ENST00000459372 104 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 RPS27P29-201ENST00000463110 252 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 RPL23AP70-201ENST00000483361 460 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 AC016632.1-201ENST00000503994 196 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 AC005741.1-201ENST00000511094 432 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 RNU2-53P-201ENST00000516257 147 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 AC115990.1-201ENST00000526957 301 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 AC009318.2-201ENST00000610917 651 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 AC069234.5-201ENST00000611056 416 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 AL359198.2-201ENST00000611836 194 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms