Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AC091021.1-201ENST00000468051 388 ntBASIC4.54□□□□□ -1.68
ATG3Q9NT62 AC132942.1-201ENST00000486753 483 ntBASIC4.54□□□□□ -1.68
ATG3Q9NT62 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.54□□□□□ -1.68
ATG3Q9NT62 AC093591.1-201ENST00000491435 481 ntBASIC4.54□□□□□ -1.68
ATG3Q9NT62 RPL21P16-201ENST00000495531 483 ntBASIC4.54□□□□□ -1.68
ATG3Q9NT62 RNU2-58P-201ENST00000516403 183 ntBASIC4.54□□□□□ -1.68
ATG3Q9NT62 RNU6-1073P-201ENST00000517182 106 ntBASIC4.54□□□□□ -1.68
ATG3Q9NT62 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.54□□□□□ -1.68
ATG3Q9NT62 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.54□□□□□ -1.68
ATG3Q9NT62 AL078605.1-201ENST00000603529 500 ntBASIC4.54□□□□□ -1.68
ATG3Q9NT62 AC110741.2-201ENST00000605278 268 ntBASIC4.54□□□□□ -1.68
ATG3Q9NT62 MIR6130-201ENST00000619419 109 ntBASIC4.54□□□□□ -1.68
ATG3Q9NT62 AL353748.2-201ENST00000622148 471 ntBASIC4.54□□□□□ -1.68
ATG3Q9NT62 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.54□□□□□ -1.68
ATG3Q9NT62 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
ATG3Q9NT62 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATG3Q9NT62 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.54□□□□□ -1.68
ATG3Q9NT62 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATG3Q9NT62 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.54□□□□□ -1.68
ATG3Q9NT62 AP001486.2-201ENST00000561652 5113 ntBASIC4.54□□□□□ -1.68
ATG3Q9NT62 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
ATG3Q9NT62 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.53□□□□□ -1.68
ATG3Q9NT62 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.53□□□□□ -1.68
ATG3Q9NT62 RNU6-600P-201ENST00000362524 99 ntBASIC4.53□□□□□ -1.68
ATG3Q9NT62 SNORD50.1-201ENST00000362987 71 ntBASIC4.53□□□□□ -1.68
ATG3Q9NT62 RNU6-1074P-201ENST00000383995 104 ntBASIC4.53□□□□□ -1.68
ATG3Q9NT62 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
ATG3Q9NT62 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.53□□□□□ -1.68
ATG3Q9NT62 RNU6-651P-201ENST00000411040 105 ntBASIC4.53□□□□□ -1.68
ATG3Q9NT62 AC090774.1-201ENST00000435925 246 ntBASIC4.53□□□□□ -1.68
ATG3Q9NT62 AC004866.2-201ENST00000438285 481 ntBASIC4.53□□□□□ -1.68
ATG3Q9NT62 HIGD1AP2-201ENST00000446367 280 ntBASIC4.53□□□□□ -1.68
ATG3Q9NT62 NDUFB4P10-201ENST00000452541 359 ntBASIC4.53□□□□□ -1.68
ATG3Q9NT62 RPL30P10-201ENST00000488148 337 ntBASIC4.53□□□□□ -1.68
ATG3Q9NT62 RPL21P13-201ENST00000488305 481 ntBASIC4.53□□□□□ -1.68
ATG3Q9NT62 SUMO2P6-201ENST00000505273 288 ntBASIC4.53□□□□□ -1.68
ATG3Q9NT62 RNU6-496P-201ENST00000516145 99 ntBASIC4.53□□□□□ -1.68
ATG3Q9NT62 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
ATG3Q9NT62 MIR4298-201ENST00000584380 73 ntBASIC4.53□□□□□ -1.68
ATG3Q9NT62 MIR548AC-201ENST00000585049 88 ntBASIC4.53□□□□□ -1.68
ATG3Q9NT62 Z83818.1-201ENST00000603584 150 ntBASIC4.53□□□□□ -1.68
ATG3Q9NT62 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.53□□□□□ -1.68
ATG3Q9NT62 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATG3Q9NT62 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.53□□□□□ -1.68
ATG3Q9NT62 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ATG3Q9NT62 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.52□□□□□ -1.69
ATG3Q9NT62 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ATG3Q9NT62 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ATG3Q9NT62 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
ATG3Q9NT62 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATG3Q9NT62 Y_RNA.8-201ENST00000362353 102 ntBASIC4.52□□□□□ -1.69
ATG3Q9NT62 SNORD113-8-201ENST00000363497 74 ntBASIC4.52□□□□□ -1.69
ATG3Q9NT62 Y_RNA.383-201ENST00000383855 97 ntBASIC4.52□□□□□ -1.69
ATG3Q9NT62 RNU6-937P-201ENST00000384325 106 ntBASIC4.52□□□□□ -1.69
ATG3Q9NT62 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.52□□□□□ -1.69
ATG3Q9NT62 RNU6-735P-201ENST00000410612 107 ntBASIC4.52□□□□□ -1.69
ATG3Q9NT62 SSXP9-201ENST00000417503 292 ntBASIC4.52□□□□□ -1.69
ATG3Q9NT62 PPP1R11P2-201ENST00000423543 382 ntBASIC4.52□□□□□ -1.69
ATG3Q9NT62 BX679664.1-201ENST00000434429 253 ntBASIC4.52□□□□□ -1.69
ATG3Q9NT62 AC022493.1-201ENST00000492984 337 ntBASIC4.52□□□□□ -1.69
ATG3Q9NT62 RNA5SP309-201ENST00000516670 106 ntBASIC4.52□□□□□ -1.69
ATG3Q9NT62 OR4H12P-201ENST00000556269 907 ntBASIC4.52□□□□□ -1.69
ATG3Q9NT62 AC023824.2-201ENST00000566185 400 ntBASIC4.52□□□□□ -1.69
ATG3Q9NT62 MIR3144-201ENST00000579460 79 ntBASIC4.52□□□□□ -1.69
ATG3Q9NT62 AP001485.1-201ENST00000604799 199 ntBASIC4.52□□□□□ -1.69
ATG3Q9NT62 AL137843.1-201ENST00000605078 385 ntBASIC4.52□□□□□ -1.69
ATG3Q9NT62 AC011921.3-201ENST00000605540 361 ntBASIC4.52□□□□□ -1.69
ATG3Q9NT62 AC104465.1-201ENST00000611365 139 ntBASIC4.52□□□□□ -1.69
ATG3Q9NT62 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.52□□□□□ -1.69
ATG3Q9NT62 AP003355.3-201ENST00000623465 114 ntBASIC4.52□□□□□ -1.69
ATG3Q9NT62 MAPK10-373ENST00000641983 6772 ntBASIC4.52□□□□□ -1.69
ATG3Q9NT62 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG3Q9NT62 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.51□□□□□ -1.69
ATG3Q9NT62 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG3Q9NT62 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG3Q9NT62 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG3Q9NT62 Y_RNA.398-201ENST00000383952 99 ntBASIC4.51□□□□□ -1.69
ATG3Q9NT62 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.51□□□□□ -1.69
ATG3Q9NT62 RPL21P66-201ENST00000426566 466 ntBASIC4.51□□□□□ -1.69
ATG3Q9NT62 AC079780.1-201ENST00000428259 207 ntBASIC4.51□□□□□ -1.69
ATG3Q9NT62 HSPE1P25-201ENST00000455484 251 ntBASIC4.51□□□□□ -1.69
ATG3Q9NT62 RNU6-1037P-201ENST00000459571 107 ntBASIC4.51□□□□□ -1.69
ATG3Q9NT62 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ATG3Q9NT62 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.51□□□□□ -1.69
ATG3Q9NT62 RNU6-579P-201ENST00000516879 102 ntBASIC4.51□□□□□ -1.69
ATG3Q9NT62 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.51□□□□□ -1.69
ATG3Q9NT62 MIR5680-201ENST00000577577 84 ntBASIC4.51□□□□□ -1.69
ATG3Q9NT62 SNORD84-203ENST00000584275 78 ntBASIC4.51□□□□□ -1.69
ATG3Q9NT62 AC072026.1-201ENST00000605023 201 ntBASIC4.51□□□□□ -1.69
ATG3Q9NT62 AC243829.7-201ENST00000633081 225 ntBASIC4.51□□□□□ -1.69
ATG3Q9NT62 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
ATG3Q9NT62 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG3Q9NT62 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG3Q9NT62 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG3Q9NT62 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG3Q9NT62 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.51□□□□□ -1.69
ATG3Q9NT62 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.5□□□□□ -1.69
ATG3Q9NT62 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ATG3Q9NT62 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.5□□□□□ -1.69
ATG3Q9NT62 U3.13-201ENST00000364804 214 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms