Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RNU4-13P-201ENST00000364019 141 ntBASIC1.48□□□□□ -2.17
TREX1Q9NSU2 MIR1262-201ENST00000408276 93 ntBASIC1.48□□□□□ -2.17
TREX1Q9NSU2 RNA5SP390-201ENST00000410191 113 ntBASIC1.48□□□□□ -2.17
TREX1Q9NSU2 RNU2-23P-201ENST00000410545 195 ntBASIC1.48□□□□□ -2.17
TREX1Q9NSU2 RNU2-48P-201ENST00000410694 191 ntBASIC1.48□□□□□ -2.17
TREX1Q9NSU2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
TREX1Q9NSU2 MTCO3P5-201ENST00000433620 714 ntBASIC1.48□□□□□ -2.17
TREX1Q9NSU2 AL603825.1-201ENST00000438481 80 ntBASIC1.48□□□□□ -2.17
TREX1Q9NSU2 RPS24P1-201ENST00000438550 371 ntBASIC1.48□□□□□ -2.17
TREX1Q9NSU2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.48□□□□□ -2.17
TREX1Q9NSU2 MTCO2P29-201ENST00000465212 189 ntBASIC1.48□□□□□ -2.17
TREX1Q9NSU2 TPT1P8-201ENST00000510120 555 ntBASIC1.48□□□□□ -2.17
TREX1Q9NSU2 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.48□□□□□ -2.17
TREX1Q9NSU2 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.48□□□□□ -2.17
TREX1Q9NSU2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.48□□□□□ -2.17
TREX1Q9NSU2 AC103810.8-201ENST00000607347 118 ntBASIC1.48□□□□□ -2.17
TREX1Q9NSU2 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.48□□□□□ -2.17
TREX1Q9NSU2 AC093648.1-201ENST00000623546 606 ntBASIC1.48□□□□□ -2.17
TREX1Q9NSU2 AL157786.1-207ENST00000627771 695 ntBASIC1.48□□□□□ -2.17
TREX1Q9NSU2 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
TREX1Q9NSU2 AP000648.3-201ENST00000623539 4507 ntBASIC1.47□□□□□ -2.17
TREX1Q9NSU2 RNU6-1214P-201ENST00000363650 109 ntBASIC1.47□□□□□ -2.17
TREX1Q9NSU2 RNU4-1-201ENST00000363925 141 ntBASIC1.47□□□□□ -2.17
TREX1Q9NSU2 RNU6-944P-201ENST00000364023 107 ntBASIC1.47□□□□□ -2.17
TREX1Q9NSU2 RNU6-60P-201ENST00000364792 103 ntBASIC1.47□□□□□ -2.17
TREX1Q9NSU2 RNU6-384P-201ENST00000364900 104 ntBASIC1.47□□□□□ -2.17
TREX1Q9NSU2 RNU6-611P-201ENST00000384276 104 ntBASIC1.47□□□□□ -2.17
TREX1Q9NSU2 CBX3P9-201ENST00000402326 552 ntBASIC1.47□□□□□ -2.17
TREX1Q9NSU2 RPL21P90-201ENST00000415692 466 ntBASIC1.47□□□□□ -2.17
TREX1Q9NSU2 MTND5P2-201ENST00000442927 1142 ntBASIC1.47□□□□□ -2.17
TREX1Q9NSU2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.47□□□□□ -2.17
TREX1Q9NSU2 HMGN2P23-201ENST00000456759 269 ntBASIC1.47□□□□□ -2.17
TREX1Q9NSU2 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.47□□□□□ -2.17
TREX1Q9NSU2 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.47□□□□□ -2.17
TREX1Q9NSU2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.47□□□□□ -2.17
TREX1Q9NSU2 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.47□□□□□ -2.17
TREX1Q9NSU2 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.47□□□□□ -2.17
TREX1Q9NSU2 HMGN1P30-201ENST00000589286 268 ntBASIC1.47□□□□□ -2.17
TREX1Q9NSU2 AC078795.2-201ENST00000602835 1252 ntBASIC1.47□□□□□ -2.17
TREX1Q9NSU2 AL353778.1-201ENST00000603149 408 ntBASIC1.47□□□□□ -2.17
TREX1Q9NSU2 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.47□□□□□ -2.17
TREX1Q9NSU2 AL359314.1-201ENST00000616913 261 ntBASIC1.47□□□□□ -2.17
TREX1Q9NSU2 AC026585.1-201ENST00000619582 524 ntBASIC1.47□□□□□ -2.17
TREX1Q9NSU2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.47□□□□□ -2.17
TREX1Q9NSU2 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.47□□□□□ -2.17
TREX1Q9NSU2 MTND5P10-201ENST00000603719 1809 ntBASIC1.47□□□□□ -2.17
TREX1Q9NSU2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
TREX1Q9NSU2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
TREX1Q9NSU2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
TREX1Q9NSU2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.46□□□□□ -2.18
TREX1Q9NSU2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
TREX1Q9NSU2 RNY1P12-201ENST00000364251 105 ntBASIC1.46□□□□□ -2.18
TREX1Q9NSU2 MIR558-201ENST00000384920 94 ntBASIC1.46□□□□□ -2.18
TREX1Q9NSU2 MIR597-201ENST00000384968 97 ntBASIC1.46□□□□□ -2.18
TREX1Q9NSU2 BTF3L4P2-201ENST00000392798 346 ntBASIC1.46□□□□□ -2.18
TREX1Q9NSU2 MIR1283-2-201ENST00000408621 87 ntBASIC1.46□□□□□ -2.18
TREX1Q9NSU2 MTCYBP5-201ENST00000423752 1135 ntBASIC1.46□□□□□ -2.18
TREX1Q9NSU2 UBE2V1P4-201ENST00000425374 344 ntBASIC1.46□□□□□ -2.18
TREX1Q9NSU2 Z73417.1-201ENST00000447373 778 ntBASIC1.46□□□□□ -2.18
TREX1Q9NSU2 USP9YP12-201ENST00000450481 570 ntBASIC1.46□□□□□ -2.18
TREX1Q9NSU2 ZNF114P1-201ENST00000453500 292 ntBASIC1.46□□□□□ -2.18
TREX1Q9NSU2 AL353752.1-201ENST00000454946 260 ntBASIC1.46□□□□□ -2.18
TREX1Q9NSU2 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.46□□□□□ -2.18
TREX1Q9NSU2 AC023790.1-201ENST00000482174 347 ntBASIC1.46□□□□□ -2.18
TREX1Q9NSU2 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.46□□□□□ -2.18
TREX1Q9NSU2 PTP4A1P4-201ENST00000512479 322 ntBASIC1.46□□□□□ -2.18
TREX1Q9NSU2 Y_RNA.675-201ENST00000516389 149 ntBASIC1.46□□□□□ -2.18
TREX1Q9NSU2 AC022616.8-201ENST00000533569 253 ntBASIC1.46□□□□□ -2.18
TREX1Q9NSU2 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.46□□□□□ -2.18
TREX1Q9NSU2 SNORD53B-201ENST00000577887 78 ntBASIC1.46□□□□□ -2.18
TREX1Q9NSU2 MIR3908-201ENST00000579798 126 ntBASIC1.46□□□□□ -2.18
TREX1Q9NSU2 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.46□□□□□ -2.18
TREX1Q9NSU2 AC063943.3-201ENST00000615562 356 ntBASIC1.46□□□□□ -2.18
TREX1Q9NSU2 AC009878.1-201ENST00000621819 340 ntBASIC1.46□□□□□ -2.18
TREX1Q9NSU2 FARSBP1-201ENST00000435808 1778 ntBASIC1.46□□□□□ -2.18
TREX1Q9NSU2 AC245060.5-201ENST00000610778 3293 ntBASIC1.45□□□□□ -2.18
TREX1Q9NSU2 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TREX1Q9NSU2 RNU5E-5P-201ENST00000365379 116 ntBASIC1.45□□□□□ -2.18
TREX1Q9NSU2 SNORD14D-201ENST00000384390 87 ntBASIC1.45□□□□□ -2.18
TREX1Q9NSU2 MIR30A-201ENST00000385092 71 ntBASIC1.45□□□□□ -2.18
TREX1Q9NSU2 SNORA67.5-201ENST00000391036 107 ntBASIC1.45□□□□□ -2.18
TREX1Q9NSU2 SNORA67.6-201ENST00000391093 99 ntBASIC1.45□□□□□ -2.18
TREX1Q9NSU2 AL031779.1-201ENST00000415663 330 ntBASIC1.45□□□□□ -2.18
TREX1Q9NSU2 AC007098.1-201ENST00000420122 367 ntBASIC1.45□□□□□ -2.18
TREX1Q9NSU2 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.45□□□□□ -2.18
TREX1Q9NSU2 AL354695.1-201ENST00000427935 228 ntBASIC1.45□□□□□ -2.18
TREX1Q9NSU2 MED13P1-201ENST00000428342 171 ntBASIC1.45□□□□□ -2.18
TREX1Q9NSU2 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.45□□□□□ -2.18
TREX1Q9NSU2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.45□□□□□ -2.18
TREX1Q9NSU2 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.45□□□□□ -2.18
TREX1Q9NSU2 AC117532.1-201ENST00000514638 323 ntBASIC1.45□□□□□ -2.18
TREX1Q9NSU2 RN7SKP219-201ENST00000516825 296 ntBASIC1.45□□□□□ -2.18
TREX1Q9NSU2 SNORA31.24-201ENST00000517232 57 ntBASIC1.45□□□□□ -2.18
TREX1Q9NSU2 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.45□□□□□ -2.18
TREX1Q9NSU2 MIR5692A1-201ENST00000580523 69 ntBASIC1.45□□□□□ -2.18
TREX1Q9NSU2 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.45□□□□□ -2.18
TREX1Q9NSU2 AC008521.1-201ENST00000587471 187 ntBASIC1.45□□□□□ -2.18
TREX1Q9NSU2 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.45□□□□□ -2.18
TREX1Q9NSU2 BNIP3P39-201ENST00000601077 554 ntBASIC1.45□□□□□ -2.18
TREX1Q9NSU2 AL645939.4-201ENST00000604495 135 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms