Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 CCDC34P1-201ENST00000507441 517 ntBASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 CBX3P7-201ENST00000532876 502 ntBASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 AP003034.1-201ENST00000534621 422 ntBASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 AL512310.1-201ENST00000548639 172 ntBASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 AC136619.2-201ENST00000563361 631 ntBASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 AC096772.1-201ENST00000609146 564 ntBASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 uc_338.34-201ENST00000617467 174 ntBASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.02□□□□□ -2.09
EXOSC3Q9NQT5 OR56A5-201ENST00000340110 738 ntBASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 RNU6-1085P-201ENST00000363576 107 ntBASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 RNU6-266P-201ENST00000364225 107 ntBASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 SNORA69-201ENST00000383895 132 ntBASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 RNU6-622P-201ENST00000384272 103 ntBASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 RNU4-53P-201ENST00000410828 140 ntBASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 MORF4L1P6-201ENST00000418771 268 ntBASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 Z82209.1-201ENST00000422141 2135 ntBASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 AC236972.1-201ENST00000433225 199 ntBASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 AL121601.2-201ENST00000438019 707 ntBASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 AC006026.2-201ENST00000457376 180 ntBASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 AC104435.1-201ENST00000483483 166 ntBASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 RNU6-1038P-201ENST00000516516 104 ntBASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 SNORA25.17-201ENST00000517184 124 ntBASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 AP001893.2-201ENST00000526949 202 ntBASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 AP002770.2-201ENST00000543613 532 ntBASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 AC073410.2-201ENST00000603240 332 ntBASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 AC009233.1-201ENST00000616477 371 ntBASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 AL359880.1-201ENST00000621879 266 ntBASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
EXOSC3Q9NQT5 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
EXOSC3Q9NQT5 RNU6-529P-201ENST00000363383 104 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 RNU6-527P-201ENST00000363425 104 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 SNORA67.1-201ENST00000364749 141 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 Y_RNA.372-201ENST00000365599 102 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 RNU6-1032P-201ENST00000384100 107 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2□□□□□ -2.09
EXOSC3Q9NQT5 OR9R1P-201ENST00000412200 877 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2□□□□□ -2.09
EXOSC3Q9NQT5 AC008267.5-201ENST00000424928 265 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 RPS3AP44-201ENST00000425466 790 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2□□□□□ -2.09
EXOSC3Q9NQT5 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2□□□□□ -2.09
EXOSC3Q9NQT5 RNU7-167P-201ENST00000459160 62 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 AC083798.1-201ENST00000472671 131 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 RPL30P12-201ENST00000474666 353 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 MTCYBP40-201ENST00000509390 1135 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 AC009646.1-201ENST00000510455 318 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2□□□□□ -2.09
EXOSC3Q9NQT5 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2□□□□□ -2.09
EXOSC3Q9NQT5 RNA5SP401-201ENST00000515920 127 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 SCARNA16.3-201ENST00000516595 184 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2□□□□□ -2.09
EXOSC3Q9NQT5 MTND4P7-201ENST00000523876 130 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 MTCO3P23-201ENST00000561363 289 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 MIR5694-201ENST00000581190 76 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 AC090897.2-201ENST00000581715 130 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 AC092954.2-201ENST00000609103 430 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 U2.17-201ENST00000611454 95 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 HULC.1-201ENST00000612720 240 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 AC073534.2-201ENST00000620377 381 ntBASIC2□□□□□ -2.09
EXOSC3Q9NQT5 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2□□□□□ -2.09
EXOSC3Q9NQT5 RNU6-1322P-201ENST00000364309 107 ntBASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 Y_RNA.399-201ENST00000383955 105 ntBASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 RNU6-301P-201ENST00000384277 107 ntBASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 RNU1-57P-201ENST00000384491 166 ntBASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 MIR186-201ENST00000384988 86 ntBASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 RNA5SP219-201ENST00000390940 113 ntBASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 RNA5SP338-201ENST00000410495 85 ntBASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 AC003685.2-201ENST00000422795 395 ntBASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 HMGN2P38-201ENST00000423806 265 ntBASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 AL356320.1-201ENST00000429616 163 ntBASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 PSPHP1-201ENST00000450062 261 ntBASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 AC087884.1-201ENST00000469738 328 ntBASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 AC090255.1-201ENST00000495779 349 ntBASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 HMGB3P3-201ENST00000510526 400 ntBASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 Y_RNA.704-201ENST00000516851 102 ntBASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 AC022880.1-201ENST00000534017 973 ntBASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 AC023050.3-201ENST00000541142 333 ntBASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 AL512360.1-201ENST00000555346 234 ntBASIC1.99□□□□□ -2.09
EXOSC3Q9NQT5 AC026464.5-201ENST00000562497 722 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms