Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
ZFYVE28Q9HCC9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.43□□□□□ -1.7
ZFYVE28Q9HCC9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 MIR448-201ENST00000362131 111 ntBASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 SNORD56.1-201ENST00000362913 68 ntBASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 RNU6-290P-201ENST00000365212 101 ntBASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 RNU1-139P-201ENST00000391307 165 ntBASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 MIR888-201ENST00000401186 77 ntBASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 MIR1298-201ENST00000408783 112 ntBASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 SNORA3C-201ENST00000408792 125 ntBASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 AC069285.2-201ENST00000440210 275 ntBASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 SNRPGP5-201ENST00000456003 220 ntBASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 SERF1AP1-201ENST00000514575 187 ntBASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 RNU6-1114P-201ENST00000516022 107 ntBASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 AC016256.1-201ENST00000547971 354 ntBASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 ZNF826P-207ENST00000622273 1910 ntBASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
ZFYVE28Q9HCC9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 AC008725.1-201ENST00000605123 2263 ntBASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 SNORA31-201ENST00000362607 130 ntBASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 Y_RNA.150-201ENST00000363562 102 ntBASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 RNU1-100P-201ENST00000365255 165 ntBASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 RNU6-318P-201ENST00000384283 103 ntBASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 SNORA48.2-201ENST00000390926 124 ntBASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 RPS4XP3-201ENST00000398541 413 ntBASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 AC074117.2-201ENST00000417130 397 ntBASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 AC083863.1-201ENST00000438811 231 ntBASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 AF186996.7-201ENST00000492781 209 ntBASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 AC097462.2-201ENST00000504623 481 ntBASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 AC091874.1-201ENST00000511402 339 ntBASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 AC100770.1-201ENST00000532310 322 ntBASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 AC019159.1-201ENST00000605094 187 ntBASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 U2.14-201ENST00000615943 113 ntBASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
ZFYVE28Q9HCC9 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
ZFYVE28Q9HCC9 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.4□□□□□ -1.7
ZFYVE28Q9HCC9 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ZFYVE28Q9HCC9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
ZFYVE28Q9HCC9 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
ZFYVE28Q9HCC9 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
ZFYVE28Q9HCC9 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ZFYVE28Q9HCC9 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
ZFYVE28Q9HCC9 RNU6-858P-201ENST00000362436 107 ntBASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 Y_RNA.83-201ENST00000363005 113 ntBASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 SNORD32A-201ENST00000364805 84 ntBASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 RNU6-102P-201ENST00000384485 104 ntBASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 MIR490-201ENST00000384865 128 ntBASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 SNORA53-201ENST00000391141 249 ntBASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 MTHFD2P2-201ENST00000407725 247 ntBASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 NDUFS5P4-201ENST00000412983 318 ntBASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 RPL23AP95-201ENST00000426806 265 ntBASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 AC104332.1-201ENST00000440471 797 ntBASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 SSXP4-201ENST00000451349 245 ntBASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 NDUFB4P10-201ENST00000452541 359 ntBASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 SEPT14P8-201ENST00000508026 178 ntBASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 NACAP3-201ENST00000552100 481 ntBASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 BRDTP1-201ENST00000605735 677 ntBASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 RNU1-30P-201ENST00000606575 163 ntBASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 AC005296.1-201ENST00000616145 209 ntBASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.4□□□□□ -1.71
ZFYVE28Q9HCC9 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
ZFYVE28Q9HCC9 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
ZFYVE28Q9HCC9 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ZFYVE28Q9HCC9 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms