Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDT1Q9H211 AC009487.2-201ENST00000420969 6821 ntBASIC3□□□□□ -1.93
CDT1Q9H211 RNU6-266P-201ENST00000364225 107 ntBASIC3□□□□□ -1.93
CDT1Q9H211 RNU1-73P-201ENST00000383971 164 ntBASIC3□□□□□ -1.93
CDT1Q9H211 RNU6-658P-201ENST00000384606 106 ntBASIC3□□□□□ -1.93
CDT1Q9H211 MIR888-201ENST00000401186 77 ntBASIC3□□□□□ -1.93
CDT1Q9H211 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3□□□□□ -1.93
CDT1Q9H211 RNA5SP21-201ENST00000410917 96 ntBASIC3□□□□□ -1.93
CDT1Q9H211 Y_RNA.623-201ENST00000411128 95 ntBASIC3□□□□□ -1.93
CDT1Q9H211 RPL37P10-201ENST00000412884 288 ntBASIC3□□□□□ -1.93
CDT1Q9H211 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3□□□□□ -1.93
CDT1Q9H211 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3□□□□□ -1.93
CDT1Q9H211 AC098614.2-201ENST00000426040 255 ntBASIC3□□□□□ -1.93
CDT1Q9H211 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3□□□□□ -1.93
CDT1Q9H211 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3□□□□□ -1.93
CDT1Q9H211 AC108938.1-201ENST00000451204 136 ntBASIC3□□□□□ -1.93
CDT1Q9H211 Y_RNA.635-201ENST00000459041 101 ntBASIC3□□□□□ -1.93
CDT1Q9H211 AC008526.1-201ENST00000509149 338 ntBASIC3□□□□□ -1.93
CDT1Q9H211 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3□□□□□ -1.93
CDT1Q9H211 MIR892C-201ENST00000516410 77 ntBASIC3□□□□□ -1.93
CDT1Q9H211 RNU6-1332P-201ENST00000516666 104 ntBASIC3□□□□□ -1.93
CDT1Q9H211 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDT1Q9H211 IGHVII-62-1-201ENST00000519283 235 ntBASIC3□□□□□ -1.93
CDT1Q9H211 AL442663.2-201ENST00000554385 511 ntBASIC3□□□□□ -1.93
CDT1Q9H211 AC040896.1-201ENST00000613819 479 ntBASIC3□□□□□ -1.93
CDT1Q9H211 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDT1Q9H211 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3□□□□□ -1.93
CDT1Q9H211 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
CDT1Q9H211 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
CDT1Q9H211 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.99□□□□□ -1.93
CDT1Q9H211 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDT1Q9H211 RPL9P7-201ENST00000330965 580 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 AC062016.1-201ENST00000355719 319 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 RNU6-1188P-201ENST00000363795 107 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 SNORD14B-201ENST00000364533 90 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 SNORA63C-201ENST00000364578 129 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDT1Q9H211 Y_RNA.480-201ENST00000384364 102 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 MTCYBP4-201ENST00000401524 249 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 MIR548P-201ENST00000408336 84 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.99□□□□□ -1.93
CDT1Q9H211 PGBD4P6-201ENST00000421501 610 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 AL139281.1-201ENST00000422120 335 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.99□□□□□ -1.93
CDT1Q9H211 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.99□□□□□ -1.93
CDT1Q9H211 AL078601.1-201ENST00000444542 271 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 AC107399.1-201ENST00000451226 265 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 RNU7-152P-201ENST00000458982 64 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 AC011005.2-201ENST00000487324 359 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.99□□□□□ -1.93
CDT1Q9H211 AC093303.1-201ENST00000514549 295 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 RN7SKP282-201ENST00000516824 299 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 RNU6-1183P-201ENST00000517054 60 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.99□□□□□ -1.93
CDT1Q9H211 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDT1Q9H211 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.99□□□□□ -1.93
CDT1Q9H211 AL391261.3-201ENST00000557194 520 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 MIR3941-201ENST00000582572 103 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.99□□□□□ -1.93
CDT1Q9H211 NUTF2P8-201ENST00000604593 363 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 RMST_4.1-201ENST00000616886 107 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.99□□□□□ -1.93
CDT1Q9H211 AC244517.12-201ENST00000623581 663 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
CDT1Q9H211 MTND5P19-201ENST00000424872 1794 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 FAM35CP-201ENST00000554755 2470 ntBASIC2.99□□□□□ -1.93
CDT1Q9H211 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
CDT1Q9H211 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.98□□□□□ -1.93
CDT1Q9H211 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CDT1Q9H211 AC092435.3-201ENST00000565538 3654 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.98□□□□□ -1.93
CDT1Q9H211 MIR26A1-201ENST00000362205 77 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 Y_RNA.128-201ENST00000363391 112 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 Y_RNA.324-201ENST00000365165 102 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 Z98749.2-208ENST00000381646 500 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 RNU6-301P-201ENST00000384277 107 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 MIR10A-201ENST00000385043 110 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 Y_RNA.646-201ENST00000410980 101 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 ATG3P1-201ENST00000419507 911 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 MTCO2P27-201ENST00000420740 428 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.98□□□□□ -1.93
CDT1Q9H211 PMCHL1-202ENST00000423102 261 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 AL627311.1-201ENST00000431514 115 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 AC112220.1-201ENST00000434628 355 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 NDUFB1P2-201ENST00000449477 176 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 MTATP6P7-201ENST00000453315 681 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 SNORD109B-201ENST00000458961 67 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 SNORD109A-201ENST00000459128 67 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 RPS29P12-201ENST00000460178 152 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 AC090525.1-201ENST00000479116 478 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 RPS27AP10-201ENST00000496103 208 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.98□□□□□ -1.93
CDT1Q9H211 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.98□□□□□ -1.93
CDT1Q9H211 RNU6-327P-201ENST00000516270 127 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 CYCSP27-201ENST00000527643 293 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.98□□□□□ -1.93
CDT1Q9H211 AC007151.1-201ENST00000572774 483 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 MIR4782-201ENST00000577987 79 ntBASIC2.98□□□□□ -1.93
CDT1Q9H211 AL355598.1-201ENST00000604169 202 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms