Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 ZNF736P7Y-201ENST00000425158 820 ntBASIC1□□□□□ -2.25
TRIM4Q9C037 USP9YP18-201ENST00000425912 695 ntBASIC1□□□□□ -2.25
TRIM4Q9C037 AL591704.1-201ENST00000432574 275 ntBASIC1□□□□□ -2.25
TRIM4Q9C037 AL591212.2-201ENST00000433923 257 ntBASIC1□□□□□ -2.25
TRIM4Q9C037 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1□□□□□ -2.25
TRIM4Q9C037 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1□□□□□ -2.25
TRIM4Q9C037 MTCYBP40-201ENST00000509390 1135 ntBASIC1□□□□□ -2.25
TRIM4Q9C037 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1□□□□□ -2.25
TRIM4Q9C037 AP003122.4-201ENST00000530980 758 ntBASIC1□□□□□ -2.25
TRIM4Q9C037 AC092451.2-201ENST00000538746 658 ntBASIC1□□□□□ -2.25
TRIM4Q9C037 AC018630.3-201ENST00000542637 96 ntBASIC1□□□□□ -2.25
TRIM4Q9C037 AC025678.1-201ENST00000567861 338 ntBASIC1□□□□□ -2.25
TRIM4Q9C037 BNIP3P30-201ENST00000601184 574 ntBASIC1□□□□□ -2.25
TRIM4Q9C037 AC004987.4-201ENST00000603383 338 ntBASIC1□□□□□ -2.25
TRIM4Q9C037 SNORD114-21-201ENST00000606412 72 ntBASIC1□□□□□ -2.25
TRIM4Q9C037 AC007742.2-201ENST00000618226 398 ntBASIC1□□□□□ -2.25
TRIM4Q9C037 AL136313.1-201ENST00000624804 202 ntBASIC1□□□□□ -2.25
TRIM4Q9C037 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
TRIM4Q9C037 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
TRIM4Q9C037 MIR302D-201ENST00000362275 68 ntBASIC0.99□□□□□ -2.25
TRIM4Q9C037 RNU6-166P-201ENST00000384371 107 ntBASIC0.99□□□□□ -2.25
TRIM4Q9C037 MIR1267-201ENST00000408723 78 ntBASIC0.99□□□□□ -2.25
TRIM4Q9C037 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.99□□□□□ -2.25
TRIM4Q9C037 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.99□□□□□ -2.25
TRIM4Q9C037 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.99□□□□□ -2.25
TRIM4Q9C037 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.99□□□□□ -2.25
TRIM4Q9C037 MTND4P25-201ENST00000441039 533 ntBASIC0.99□□□□□ -2.25
TRIM4Q9C037 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.99□□□□□ -2.25
TRIM4Q9C037 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
TRIM4Q9C037 AC087477.1-201ENST00000465747 340 ntBASIC0.99□□□□□ -2.25
TRIM4Q9C037 RPL30P1-201ENST00000488676 339 ntBASIC0.99□□□□□ -2.25
TRIM4Q9C037 RNA5SP384-201ENST00000516615 116 ntBASIC0.99□□□□□ -2.25
TRIM4Q9C037 RN7SKP256-201ENST00000517201 314 ntBASIC0.99□□□□□ -2.25
TRIM4Q9C037 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.99□□□□□ -2.25
TRIM4Q9C037 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.99□□□□□ -2.25
TRIM4Q9C037 DEFB130C-202ENST00000530001 230 ntBASIC0.99□□□□□ -2.25
TRIM4Q9C037 AC087897.1-201ENST00000550134 156 ntBASIC0.99□□□□□ -2.25
TRIM4Q9C037 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.99□□□□□ -2.25
TRIM4Q9C037 AL512347.1-201ENST00000566420 503 ntBASIC0.99□□□□□ -2.25
TRIM4Q9C037 AC012414.6-201ENST00000568241 401 ntBASIC0.99□□□□□ -2.25
TRIM4Q9C037 MIR3169-201ENST00000578032 83 ntBASIC0.99□□□□□ -2.25
TRIM4Q9C037 NIFKP6-201ENST00000598115 845 ntBASIC0.99□□□□□ -2.25
TRIM4Q9C037 AL358072.1-201ENST00000604156 575 ntBASIC0.99□□□□□ -2.25
TRIM4Q9C037 AC123912.5-201ENST00000605470 343 ntBASIC0.99□□□□□ -2.25
TRIM4Q9C037 AL109933.3-201ENST00000619095 188 ntBASIC0.99□□□□□ -2.25
TRIM4Q9C037 PCMTD1P7-201ENST00000634506 357 ntBASIC0.99□□□□□ -2.25
TRIM4Q9C037 RNU6-414P-201ENST00000363705 104 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 RNA5SP493-201ENST00000364115 91 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 RNU6-777P-201ENST00000364265 104 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 SNORD1A-201ENST00000364968 72 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 RNU6-716P-201ENST00000365621 103 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 RNU6-701P-201ENST00000384059 107 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 RNU6-17P-201ENST00000384245 107 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 RNU6-843P-201ENST00000384454 104 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 RNU6-18P-201ENST00000384527 107 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 MTND3P20-201ENST00000407663 186 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.98□□□□□ -2.25
TRIM4Q9C037 UBE2V1P10-201ENST00000414685 269 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.98□□□□□ -2.25
TRIM4Q9C037 AC016831.2-201ENST00000417179 352 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.98□□□□□ -2.25
TRIM4Q9C037 UBE2D3P3-201ENST00000426992 425 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 RPL17P35-201ENST00000432217 549 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.98□□□□□ -2.25
TRIM4Q9C037 HAR1A.1-201ENST00000459583 118 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 RPL30P6-201ENST00000475925 342 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.98□□□□□ -2.25
TRIM4Q9C037 AC026616.1-201ENST00000523157 525 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.98□□□□□ -2.25
TRIM4Q9C037 AL132657.2-201ENST00000564417 358 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 AC136618.2-201ENST00000575091 400 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 MIR3973-201ENST00000579824 107 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 AL355472.4-201ENST00000610233 626 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 MIR8063-201ENST00000621930 81 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 AC092656.1-203ENST00000624134 423 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 AC008993.2-201ENST00000631744 806 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 MIR3529-201ENST00000637713 78 ntBASIC0.98□□□□□ -2.25
TRIM4Q9C037 RNA5SP257-201ENST00000363023 116 ntBASIC0.97□□□□□ -2.25
TRIM4Q9C037 RNU6-1284P-201ENST00000363701 100 ntBASIC0.97□□□□□ -2.25
TRIM4Q9C037 RNU6-1210P-201ENST00000363775 107 ntBASIC0.97□□□□□ -2.25
TRIM4Q9C037 snoZ40.1-201ENST00000364540 72 ntBASIC0.97□□□□□ -2.25
TRIM4Q9C037 Y_RNA.258-201ENST00000364613 105 ntBASIC0.97□□□□□ -2.25
TRIM4Q9C037 AC119751.3-201ENST00000399720 670 ntBASIC0.97□□□□□ -2.25
TRIM4Q9C037 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.97□□□□□ -2.25
TRIM4Q9C037 AL953862.1-201ENST00000423016 168 ntBASIC0.97□□□□□ -2.25
TRIM4Q9C037 MTCO3P5-201ENST00000433620 714 ntBASIC0.97□□□□□ -2.25
TRIM4Q9C037 SNRPEP7-201ENST00000438350 220 ntBASIC0.97□□□□□ -2.25
TRIM4Q9C037 GDI2P2-201ENST00000445131 608 ntBASIC0.97□□□□□ -2.25
TRIM4Q9C037 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.97□□□□□ -2.25
TRIM4Q9C037 RPL30P7-201ENST00000479312 323 ntBASIC0.97□□□□□ -2.25
TRIM4Q9C037 AL133373.1-201ENST00000497098 94 ntBASIC0.97□□□□□ -2.25
TRIM4Q9C037 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.97□□□□□ -2.25
TRIM4Q9C037 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TRIM4Q9C037 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.97□□□□□ -2.25
TRIM4Q9C037 AL356057.1-201ENST00000533798 831 ntBASIC0.97□□□□□ -2.25
TRIM4Q9C037 AC090115.3-201ENST00000553218 849 ntBASIC0.97□□□□□ -2.25
TRIM4Q9C037 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.97□□□□□ -2.25
TRIM4Q9C037 MTCYBP33-201ENST00000575007 1130 ntBASIC0.97□□□□□ -2.25
TRIM4Q9C037 MIR4714-201ENST00000580728 77 ntBASIC0.97□□□□□ -2.25
TRIM4Q9C037 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms