Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 RPL30P12-201ENST00000474666 353 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 PTP4A1P4-201ENST00000512479 322 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 RNU6-1178P-201ENST00000516674 107 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 AC069113.1-201ENST00000517763 267 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 CYCSP27-201ENST00000527643 293 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 PRELID2P1-201ENST00000552837 301 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 AC026464.5-201ENST00000562497 722 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 CYP2C61P-201ENST00000604072 290 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 AC018889.1-201ENST00000605372 397 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 AL137847.3-201ENST00000611521 109 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 ZNF658B-202ENST00000615961 3375 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 RNA5SP126-201ENST00000365092 109 ntBASIC2.97□□□□□ -1.93
CHMP4AQ9BY43 RNU6-1029P-201ENST00000384109 107 ntBASIC2.97□□□□□ -1.93
CHMP4AQ9BY43 HMGB3P2-201ENST00000411913 584 ntBASIC2.97□□□□□ -1.93
CHMP4AQ9BY43 EIF4EP2-201ENST00000422816 654 ntBASIC2.97□□□□□ -1.93
CHMP4AQ9BY43 HMGN2P38-201ENST00000423806 265 ntBASIC2.97□□□□□ -1.93
CHMP4AQ9BY43 AL360221.1-201ENST00000445989 335 ntBASIC2.97□□□□□ -1.93
CHMP4AQ9BY43 MTCYBP1-201ENST00000454315 1119 ntBASIC2.97□□□□□ -1.93
CHMP4AQ9BY43 PRELID3BP1-201ENST00000457142 540 ntBASIC2.97□□□□□ -1.93
CHMP4AQ9BY43 AC105417.1-201ENST00000514691 285 ntBASIC2.97□□□□□ -1.93
CHMP4AQ9BY43 RNA5SP402-201ENST00000517148 110 ntBASIC2.97□□□□□ -1.93
CHMP4AQ9BY43 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.97□□□□□ -1.93
CHMP4AQ9BY43 COPS8P3-201ENST00000526024 482 ntBASIC2.97□□□□□ -1.93
CHMP4AQ9BY43 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.97□□□□□ -1.93
CHMP4AQ9BY43 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.97□□□□□ -1.93
CHMP4AQ9BY43 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.97□□□□□ -1.93
CHMP4AQ9BY43 MIR4703-201ENST00000577728 79 ntBASIC2.97□□□□□ -1.93
CHMP4AQ9BY43 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.97□□□□□ -1.93
CHMP4AQ9BY43 AC040904.1-201ENST00000590850 223 ntBASIC2.97□□□□□ -1.93
CHMP4AQ9BY43 AC091805.2-201ENST00000603848 235 ntBASIC2.97□□□□□ -1.93
CHMP4AQ9BY43 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.97□□□□□ -1.93
CHMP4AQ9BY43 AC092881.1-201ENST00000638218 2733 ntBASIC2.97□□□□□ -1.93
CHMP4AQ9BY43 AL390237.1-201ENST00000404226 1415 ntBASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 RNA5SP289-201ENST00000362332 137 ntBASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 RNU6-456P-201ENST00000384493 107 ntBASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 RNU2-48P-201ENST00000410694 191 ntBASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 AC244505.5-201ENST00000443639 207 ntBASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 AC079382.1-201ENST00000493346 557 ntBASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 MTCO3P28-201ENST00000513351 515 ntBASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 RNA5SP281-201ENST00000516504 135 ntBASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 Y_RNA.695-201ENST00000516715 107 ntBASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 MIR1273D-201ENST00000577266 86 ntBASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 Z84480.1-201ENST00000605131 311 ntBASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 AP000654.2-201ENST00000605633 586 ntBASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 Z82243.1-201ENST00000609432 473 ntBASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 YWHAEP7-203ENST00000622054 312 ntBASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 AC005858.4-201ENST00000623191 700 ntBASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 AC009487.4-201ENST00000624969 3585 ntBASIC2.96□□□□□ -1.94
CHMP4AQ9BY43 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CHMP4AQ9BY43 RNU6-1141P-201ENST00000364520 107 ntBASIC2.95□□□□□ -1.94
CHMP4AQ9BY43 XGY1-201ENST00000381172 446 ntBASIC2.95□□□□□ -1.94
CHMP4AQ9BY43 RNU6-393P-201ENST00000384475 107 ntBASIC2.95□□□□□ -1.94
CHMP4AQ9BY43 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.95□□□□□ -1.94
CHMP4AQ9BY43 AC244636.1-201ENST00000421152 228 ntBASIC2.95□□□□□ -1.94
CHMP4AQ9BY43 KATNBL1P3-201ENST00000443475 909 ntBASIC2.95□□□□□ -1.94
CHMP4AQ9BY43 RNU6-333P-201ENST00000459117 107 ntBASIC2.95□□□□□ -1.94
CHMP4AQ9BY43 AC008413.1-201ENST00000511864 177 ntBASIC2.95□□□□□ -1.94
CHMP4AQ9BY43 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.95□□□□□ -1.94
CHMP4AQ9BY43 TRAV32-201ENST00000553993 340 ntBASIC2.95□□□□□ -1.94
CHMP4AQ9BY43 AC091544.4-201ENST00000555268 342 ntBASIC2.95□□□□□ -1.94
CHMP4AQ9BY43 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.95□□□□□ -1.94
CHMP4AQ9BY43 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.95□□□□□ -1.94
CHMP4AQ9BY43 MIR6766-201ENST00000622641 72 ntBASIC2.95□□□□□ -1.94
CHMP4AQ9BY43 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.95□□□□□ -1.94
CHMP4AQ9BY43 MIR3974-201ENST00000637126 96 ntBASIC2.95□□□□□ -1.94
CHMP4AQ9BY43 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.95□□□□□ -1.94
CHMP4AQ9BY43 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHMP4AQ9BY43 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.94□□□□□ -1.94
CHMP4AQ9BY43 MIR21-201ENST00000362134 72 ntBASIC2.94□□□□□ -1.94
CHMP4AQ9BY43 RNY3P9-201ENST00000384727 106 ntBASIC2.94□□□□□ -1.94
CHMP4AQ9BY43 SNORA48.3-201ENST00000391081 134 ntBASIC2.94□□□□□ -1.94
CHMP4AQ9BY43 AC090960.1-201ENST00000421072 306 ntBASIC2.94□□□□□ -1.94
CHMP4AQ9BY43 AC112492.4-201ENST00000456549 352 ntBASIC2.94□□□□□ -1.94
CHMP4AQ9BY43 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.94□□□□□ -1.94
CHMP4AQ9BY43 RNA5SP200-201ENST00000516360 103 ntBASIC2.94□□□□□ -1.94
CHMP4AQ9BY43 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.94□□□□□ -1.94
CHMP4AQ9BY43 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.94□□□□□ -1.94
CHMP4AQ9BY43 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.94□□□□□ -1.94
CHMP4AQ9BY43 MIR4299-201ENST00000577899 72 ntBASIC2.94□□□□□ -1.94
CHMP4AQ9BY43 AP001596.2-201ENST00000608410 312 ntBASIC2.94□□□□□ -1.94
CHMP4AQ9BY43 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CHMP4AQ9BY43 AC022202.1-201ENST00000613515 211 ntBASIC2.94□□□□□ -1.94
CHMP4AQ9BY43 AL773524.1-201ENST00000614065 229 ntBASIC2.94□□□□□ -1.94
CHMP4AQ9BY43 AL158063.1-201ENST00000615349 536 ntBASIC2.94□□□□□ -1.94
CHMP4AQ9BY43 MIR6132-201ENST00000622083 109 ntBASIC2.94□□□□□ -1.94
CHMP4AQ9BY43 AC005609.4-201ENST00000625071 447 ntBASIC2.94□□□□□ -1.94
CHMP4AQ9BY43 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.94□□□□□ -1.94
CHMP4AQ9BY43 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHMP4AQ9BY43 MTND4P14-201ENST00000435799 1354 ntBASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 MIR544A-201ENST00000384855 91 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms