Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL354950.2-201ENST00000617939 290 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AC073534.2-201ENST00000620377 381 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AC098657.3-201ENST00000620434 263 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 FRG1KP-201ENST00000623592 341 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AC073308.1-201ENST00000623696 305 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AC005609.4-201ENST00000625071 447 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 RNU6-179P-201ENST00000363350 107 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 RNU6-1085P-201ENST00000363576 107 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 RNU4-12P-201ENST00000365233 139 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 SNORA69-201ENST00000383895 132 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 SNORA75B-201ENST00000384053 137 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 Y_RNA.450-201ENST00000384198 113 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 RNU6-1035P-201ENST00000384477 107 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 RNU6-903P-201ENST00000391270 109 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 RNA5SP247-201ENST00000411181 105 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AL109913.1-201ENST00000421173 514 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 EIF1P1-201ENST00000421436 341 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 ELOCP14-201ENST00000428070 331 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AL356867.1-201ENST00000429623 299 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AL592045.1-201ENST00000429867 352 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AC000111.3-201ENST00000433478 193 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 ELOCP7-201ENST00000439968 331 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 MTND4P25-201ENST00000441039 533 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 MTND1P18-201ENST00000448191 573 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AC073415.1-201ENST00000449240 153 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 FABP5P15-201ENST00000453566 214 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 RPL12P25-201ENST00000455592 494 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AL356010.1-201ENST00000456364 102 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 RNA5SP233-201ENST00000459153 113 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AC083798.1-201ENST00000472671 131 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AC092989.1-201ENST00000481235 277 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 RPL39P36-201ENST00000490784 156 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AC139453.3-201ENST00000493276 369 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 RPS29P11-201ENST00000496507 171 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AC023141.11-201ENST00000508864 202 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 RNA5SP401-201ENST00000515920 127 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 SNORA40.12-201ENST00000516329 111 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 RNU6-914P-201ENST00000516749 109 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 RNU6-685P-201ENST00000517088 95 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AC136619.2-201ENST00000563361 631 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AC025678.1-201ENST00000567861 338 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AL355877.2-201ENST00000603670 358 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AL158032.1-201ENST00000605401 106 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AC068944.2-201ENST00000610373 403 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 U4.5-201ENST00000617137 123 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 Z99571.1-201ENST00000636677 394 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 MIR3688-2-201ENST00000636963 87 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AL049641.1-201ENST00000441055 1948 ntBASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RSPO3Q9BXY4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 AL354685.2-201ENST00000448218 1447 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 RNU6-1159P-201ENST00000362933 107 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 RNY4P14-201ENST00000363656 96 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 RNA5SP99-201ENST00000364020 114 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 RNU6-371P-201ENST00000364283 108 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 RNU6-996P-201ENST00000365438 107 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 RNU6-817P-201ENST00000391083 104 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 CISD1P1-201ENST00000393907 327 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 RNU2-40P-201ENST00000410833 196 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 EEF1A1P40-201ENST00000412883 573 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 MTCYBP5-201ENST00000423752 1135 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 MTCO1P20-201ENST00000425366 358 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 TIMM9P3-201ENST00000428659 274 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 AL591212.2-201ENST00000433923 257 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 AL512844.2-201ENST00000433990 593 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 Z82210.1-201ENST00000440037 231 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 FABP5P13-201ENST00000452144 328 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 RNU7-182P-201ENST00000459009 62 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 GMFBP1-201ENST00000467831 427 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 TRBV1-201ENST00000476502 284 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 AL160314.1-201ENST00000490836 438 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms