Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC130454.1-201ENST00000622948 401 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 MIR1248-201ENST00000629190 106 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
UPK3BQ9BT76 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
UPK3BQ9BT76 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 MIR424-201ENST00000362227 98 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 RNU6-23P-201ENST00000363283 107 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 RNU6-384P-201ENST00000364900 104 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 MIR578-201ENST00000384828 96 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 MIR150-201ENST00000385048 84 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 SNORA67.6-201ENST00000391093 99 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 SNORD115.1-201ENST00000391109 76 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 NCOR1P3-201ENST00000420479 303 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 AC108667.1-201ENST00000428618 249 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 RPS15AP10-201ENST00000432472 382 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 AL035666.1-201ENST00000446195 348 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 RPL39P29-201ENST00000447779 157 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 AC108078.2-201ENST00000510750 236 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 RNU5A-4P-201ENST00000516588 111 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 SNORA31.24-201ENST00000517232 57 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 AL160236.1-201ENST00000556317 195 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 MTND4P33-201ENST00000556706 766 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 AL512598.1-201ENST00000610158 273 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 AC092106.3-201ENST00000611308 722 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 MIR7974-201ENST00000615835 79 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 AL159153.1-201ENST00000619688 317 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 AC008993.2-201ENST00000631744 806 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 OR4G3P-201ENST00000633500 913 ntBASIC1.07□□□□□ -2.24
UPK3BQ9BT76 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.07□□□□□ -2.24
UPK3BQ9BT76 AC245060.5-201ENST00000610778 3293 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 RNU6-660P-201ENST00000364566 109 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 RNU6-60P-201ENST00000364792 103 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 RNU6-533P-201ENST00000384144 107 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 RNU6-1200P-201ENST00000384162 107 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 RNU6-160P-201ENST00000384591 107 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 SNORA17.3-201ENST00000391159 129 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 MRPL42P2-201ENST00000403169 426 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 RNA5SP100-201ENST00000410903 110 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 RNA5SP59-201ENST00000410922 110 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 RNA5SP111-201ENST00000411386 101 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.06□□□□□ -2.24
UPK3BQ9BT76 AL513185.2-201ENST00000425543 193 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 MTCO3P46-201ENST00000425787 232 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 HMGB1P18-201ENST00000438801 619 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.06□□□□□ -2.24
UPK3BQ9BT76 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.06□□□□□ -2.24
UPK3BQ9BT76 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.06□□□□□ -2.24
UPK3BQ9BT76 Y_RNA.638-201ENST00000459374 113 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 AC010587.1-201ENST00000505809 469 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.06□□□□□ -2.24
UPK3BQ9BT76 RNVU1-2-201ENST00000516326 135 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.06□□□□□ -2.24
UPK3BQ9BT76 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.06□□□□□ -2.24
UPK3BQ9BT76 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.06□□□□□ -2.24
UPK3BQ9BT76 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.06□□□□□ -2.24
UPK3BQ9BT76 MIR5692A1-201ENST00000580523 69 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 MIR4999-201ENST00000585029 91 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 AL359999.1-201ENST00000604513 294 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 AC123912.5-201ENST00000605470 343 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 AP000654.2-201ENST00000605633 586 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 RNU6-87P-201ENST00000607561 108 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 uc_338.5-201ENST00000611839 155 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 MIR8074-201ENST00000615081 81 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 AP002782.1-201ENST00000623107 614 ntBASIC1.06□□□□□ -2.24
UPK3BQ9BT76 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.06□□□□□ -2.24
UPK3BQ9BT76 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
UPK3BQ9BT76 MIR378A-201ENST00000362177 66 ntBASIC1.05□□□□□ -2.24
UPK3BQ9BT76 RNU6-661P-201ENST00000362409 107 ntBASIC1.05□□□□□ -2.24
UPK3BQ9BT76 Y_RNA.140-201ENST00000363474 103 ntBASIC1.05□□□□□ -2.24
UPK3BQ9BT76 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
UPK3BQ9BT76 RNU6-338P-201ENST00000383888 105 ntBASIC1.05□□□□□ -2.24
UPK3BQ9BT76 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
UPK3BQ9BT76 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.05□□□□□ -2.24
UPK3BQ9BT76 AL591043.1-201ENST00000432461 424 ntBASIC1.05□□□□□ -2.24
UPK3BQ9BT76 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms