Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TRAPPC13P1-201ENST00000435991 1062 ntBASIC-0.28□□□□□ -2.45
CSMD1Q96PZ7 DAP3P1-201ENST00000441522 278 ntBASIC-0.28□□□□□ -2.45
CSMD1Q96PZ7 AC125611.1-201ENST00000549563 229 ntBASIC-0.28□□□□□ -2.45
CSMD1Q96PZ7 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.28□□□□□ -2.45
CSMD1Q96PZ7 AC138749.5-201ENST00000611461 208 ntBASIC-0.28□□□□□ -2.45
CSMD1Q96PZ7 AC100810.6-201ENST00000638068 285 ntBASIC-0.28□□□□□ -2.45
CSMD1Q96PZ7 AL590632.1-201ENST00000424289 371 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 C1DP1-201ENST00000426049 402 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 MTCO2P20-201ENST00000437339 673 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 SNORA4.4-201ENST00000515921 135 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 AC027309.3-201ENST00000623419 351 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 AC096656.1-201ENST00000623826 1364 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 SNORA42.1-201ENST00000363515 137 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 SNORA1.1-201ENST00000364671 133 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 MIR95-201ENST00000385072 81 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 HNRNPDP2-201ENST00000406475 478 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 AC114482.1-201ENST00000418010 247 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 SNORA31.6-201ENST00000516241 130 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 AC233702.2-202ENST00000562547 291 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 AP003973.1-201ENST00000604639 691 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 AL022345.1-201ENST00000607292 135 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 AL031667.3-201ENST00000620124 655 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 AC063976.4-201ENST00000421971 163 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 AC023194.1-201ENST00000493084 308 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 MIR4765-201ENST00000585007 77 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 AC040168.1-201ENST00000623594 991 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 AC009033.1-201ENST00000624279 431 ntBASIC-0.29□□□□□ -2.46
CSMD1Q96PZ7 RNU6-877P-201ENST00000383868 107 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 SNORA36.2-201ENST00000384004 127 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 MIR196A2-201ENST00000385189 110 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 MIR29C-201ENST00000385231 88 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 RNU6-735P-201ENST00000410612 107 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 MIR3115-201ENST00000577915 68 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 AC069304.3-201ENST00000603938 1084 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 AC112220.3-201ENST00000605502 502 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 AL662814.1-201ENST00000617364 121 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 AL596245.1-201ENST00000618994 362 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 Y_RNA.255-201ENST00000364581 97 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 NANOGP2-201ENST00000435391 727 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 UBE2V1P8-201ENST00000437166 265 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 AC074344.1-201ENST00000512823 224 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 AC040926.1-201ENST00000530195 238 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 RNU6-414P-201ENST00000363705 104 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 MIR610-201ENST00000385139 96 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 AL355796.1-201ENST00000406706 323 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 PNPLA4P1-201ENST00000458328 305 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 SNRPGP20-201ENST00000604477 205 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 uc_338.15-201ENST00000615470 191 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 AL359314.1-201ENST00000616913 261 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.3□□□□□ -2.46
CSMD1Q96PZ7 SNORD14C-201ENST00000365382 88 ntBASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 SNORA75.3-201ENST00000391231 150 ntBASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 AP003392.2-201ENST00000527269 208 ntBASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 AC060771.1-201ENST00000582031 164 ntBASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 AC092447.10-201ENST00000620607 1652 ntBASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 AC244098.3-201ENST00000424803 96 ntBASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 RAB11AP1-201ENST00000442978 646 ntBASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 MTCYBP3-201ENST00000445588 1137 ntBASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 SNORD114-12-201ENST00000365400 75 ntBASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 RPS15AP40-201ENST00000419621 391 ntBASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 Z77249.1-201ENST00000444622 1175 ntBASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 RAD1P2-201ENST00000446414 663 ntBASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 RPS29P15-201ENST00000458329 171 ntBASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 SUMO2P16-201ENST00000519475 264 ntBASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 CYCSP27-201ENST00000527643 293 ntBASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 AP001330.4-201ENST00000604350 154 ntBASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 AC105148.1-201ENST00000604961 409 ntBASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 AC064807.4-201ENST00000607201 407 ntBASIC-0.31□□□□□ -2.46
CSMD1Q96PZ7 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.32□□□□□ -2.46
CSMD1Q96PZ7 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.32□□□□□ -2.46
CSMD1Q96PZ7 RNU6-950P-201ENST00000384651 107 ntBASIC-0.32□□□□□ -2.46
CSMD1Q96PZ7 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC-0.32□□□□□ -2.46
CSMD1Q96PZ7 AC109327.2-201ENST00000448339 378 ntBASIC-0.32□□□□□ -2.46
CSMD1Q96PZ7 MIR1246-201ENST00000636535 73 ntBASIC-0.32□□□□□ -2.46
CSMD1Q96PZ7 RNU11-3P-201ENST00000391111 133 ntBASIC-0.32□□□□□ -2.46
CSMD1Q96PZ7 SNORD99-201ENST00000408612 74 ntBASIC-0.32□□□□□ -2.46
CSMD1Q96PZ7 UBE2V1P4-201ENST00000425374 344 ntBASIC-0.32□□□□□ -2.46
CSMD1Q96PZ7 AC073261.1-201ENST00000429409 121 ntBASIC-0.32□□□□□ -2.46
CSMD1Q96PZ7 GTF2IP3-201ENST00000433887 494 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms