Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC7Q96M83 AC012414.6-201ENST00000568241 401 ntBASIC2.17□□□□□ -2.06
CCDC7Q96M83 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC7Q96M83 SNORD53B-201ENST00000577887 78 ntBASIC2.17□□□□□ -2.06
CCDC7Q96M83 AC010928.2-201ENST00000588017 287 ntBASIC2.17□□□□□ -2.06
CCDC7Q96M83 AC098848.2-201ENST00000588023 330 ntBASIC2.17□□□□□ -2.06
CCDC7Q96M83 MIR98-201ENST00000606724 119 ntBASIC2.17□□□□□ -2.06
CCDC7Q96M83 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC7Q96M83 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC7Q96M83 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC7Q96M83 RNU6-60P-201ENST00000364792 103 ntBASIC2.16□□□□□ -2.06
CCDC7Q96M83 Y_RNA.327-201ENST00000365201 102 ntBASIC2.16□□□□□ -2.06
CCDC7Q96M83 RNU6-297P-201ENST00000384636 107 ntBASIC2.16□□□□□ -2.06
CCDC7Q96M83 MIR578-201ENST00000384828 96 ntBASIC2.16□□□□□ -2.06
CCDC7Q96M83 MIR320A-201ENST00000385302 82 ntBASIC2.16□□□□□ -2.06
CCDC7Q96M83 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.16□□□□□ -2.06
CCDC7Q96M83 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC7Q96M83 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC7Q96M83 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC7Q96M83 RPL31P35-201ENST00000431058 377 ntBASIC2.16□□□□□ -2.06
CCDC7Q96M83 AL353706.1-201ENST00000436728 494 ntBASIC2.16□□□□□ -2.06
CCDC7Q96M83 BET1P1-201ENST00000482276 359 ntBASIC2.16□□□□□ -2.06
CCDC7Q96M83 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC7Q96M83 SNORA18.6-201ENST00000516792 115 ntBASIC2.16□□□□□ -2.06
CCDC7Q96M83 AC079598.5-201ENST00000547460 117 ntBASIC2.16□□□□□ -2.06
CCDC7Q96M83 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC7Q96M83 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC7Q96M83 AC024581.2-201ENST00000619986 252 ntBASIC2.16□□□□□ -2.06
CCDC7Q96M83 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
CCDC7Q96M83 AC138649.3-201ENST00000622154 254 ntBASIC2.16□□□□□ -2.06
CCDC7Q96M83 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CCDC7Q96M83 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC7Q96M83 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
CCDC7Q96M83 RNU4-13P-201ENST00000364019 141 ntBASIC2.15□□□□□ -2.07
CCDC7Q96M83 SNORD14B-201ENST00000364533 90 ntBASIC2.15□□□□□ -2.07
CCDC7Q96M83 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.15□□□□□ -2.07
CCDC7Q96M83 AL031779.1-201ENST00000415663 330 ntBASIC2.15□□□□□ -2.07
CCDC7Q96M83 AL353621.1-201ENST00000418219 243 ntBASIC2.15□□□□□ -2.07
CCDC7Q96M83 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC7Q96M83 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC7Q96M83 NDUFA5P4-201ENST00000436704 385 ntBASIC2.15□□□□□ -2.07
CCDC7Q96M83 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC7Q96M83 DNAJC19P4-201ENST00000440115 345 ntBASIC2.15□□□□□ -2.07
CCDC7Q96M83 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.15□□□□□ -2.07
CCDC7Q96M83 NDUFB1P2-201ENST00000449477 176 ntBASIC2.15□□□□□ -2.07
CCDC7Q96M83 AC009474.2-201ENST00000451383 136 ntBASIC2.15□□□□□ -2.07
CCDC7Q96M83 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC7Q96M83 MTCYBP1-201ENST00000454315 1119 ntBASIC2.15□□□□□ -2.07
CCDC7Q96M83 RNU6-410P-201ENST00000517006 107 ntBASIC2.15□□□□□ -2.07
CCDC7Q96M83 AP005902.1-201ENST00000521358 186 ntBASIC2.15□□□□□ -2.07
CCDC7Q96M83 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC7Q96M83 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC7Q96M83 AL138889.2-201ENST00000603883 242 ntBASIC2.15□□□□□ -2.07
CCDC7Q96M83 Z94722.1-201ENST00000604328 474 ntBASIC2.15□□□□□ -2.07
CCDC7Q96M83 RNU6-91P-201ENST00000607774 107 ntBASIC2.15□□□□□ -2.07
CCDC7Q96M83 AC093648.1-201ENST00000623546 606 ntBASIC2.15□□□□□ -2.07
CCDC7Q96M83 AL359740.1-201ENST00000624340 592 ntBASIC2.15□□□□□ -2.07
CCDC7Q96M83 U6.114-201ENST00000636407 96 ntBASIC2.15□□□□□ -2.07
CCDC7Q96M83 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.15□□□□□ -2.07
CCDC7Q96M83 AC006026.1-201ENST00000444025 1803 ntBASIC2.15□□□□□ -2.07
CCDC7Q96M83 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
CCDC7Q96M83 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC7Q96M83 Y_RNA.201-201ENST00000364052 96 ntBASIC2.14□□□□□ -2.07
CCDC7Q96M83 RNU4-91P-201ENST00000364778 135 ntBASIC2.14□□□□□ -2.07
CCDC7Q96M83 Y_RNA.576-201ENST00000384781 102 ntBASIC2.14□□□□□ -2.07
CCDC7Q96M83 MIR489-201ENST00000384923 84 ntBASIC2.14□□□□□ -2.07
CCDC7Q96M83 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CCDC7Q96M83 RNU6-387P-201ENST00000411331 105 ntBASIC2.14□□□□□ -2.07
CCDC7Q96M83 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC7Q96M83 RPL21P90-201ENST00000415692 466 ntBASIC2.14□□□□□ -2.07
CCDC7Q96M83 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC7Q96M83 BX295541.1-201ENST00000417774 250 ntBASIC2.14□□□□□ -2.07
CCDC7Q96M83 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC7Q96M83 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.14□□□□□ -2.07
CCDC7Q96M83 GPR143P-201ENST00000434155 205 ntBASIC2.14□□□□□ -2.07
CCDC7Q96M83 AC079781.2-201ENST00000446424 169 ntBASIC2.14□□□□□ -2.07
CCDC7Q96M83 AL137159.1-201ENST00000452808 512 ntBASIC2.14□□□□□ -2.07
CCDC7Q96M83 AL139109.1-201ENST00000455491 297 ntBASIC2.14□□□□□ -2.07
CCDC7Q96M83 MED28P2-201ENST00000475771 317 ntBASIC2.14□□□□□ -2.07
CCDC7Q96M83 AC018437.1-201ENST00000492214 406 ntBASIC2.14□□□□□ -2.07
CCDC7Q96M83 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.14□□□□□ -2.07
CCDC7Q96M83 OR5AL2P-201ENST00000532185 920 ntBASIC2.14□□□□□ -2.07
CCDC7Q96M83 CBX3P7-201ENST00000532876 502 ntBASIC2.14□□□□□ -2.07
CCDC7Q96M83 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC7Q96M83 AL133241.1-201ENST00000556832 487 ntBASIC2.14□□□□□ -2.07
CCDC7Q96M83 AC064872.1-201ENST00000604823 1072 ntBASIC2.14□□□□□ -2.07
CCDC7Q96M83 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.14□□□□□ -2.07
CCDC7Q96M83 AL359851.1-201ENST00000569460 4997 ntBASIC2.14□□□□□ -2.07
CCDC7Q96M83 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC7Q96M83 RNU1-42P-201ENST00000364033 160 ntBASIC2.13□□□□□ -2.07
CCDC7Q96M83 Y_RNA.367-201ENST00000365544 101 ntBASIC2.13□□□□□ -2.07
CCDC7Q96M83 RNU6-72P-201ENST00000384285 79 ntBASIC2.13□□□□□ -2.07
CCDC7Q96M83 MTND3P17-201ENST00000416968 344 ntBASIC2.13□□□□□ -2.07
CCDC7Q96M83 AC138623.1-201ENST00000418060 216 ntBASIC2.13□□□□□ -2.07
CCDC7Q96M83 C1DP2-201ENST00000418167 426 ntBASIC2.13□□□□□ -2.07
CCDC7Q96M83 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC7Q96M83 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC7Q96M83 AC124916.1-201ENST00000444020 547 ntBASIC2.13□□□□□ -2.07
CCDC7Q96M83 MTCO2P6-201ENST00000463134 685 ntBASIC2.13□□□□□ -2.07
CCDC7Q96M83 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms