Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 Y_RNA.668-201ENST00000516233 93 ntBASIC3.34□□□□□ -1.87
PDLIM2Q96JY6 SCARNA15.2-201ENST00000516409 127 ntBASIC3.34□□□□□ -1.87
PDLIM2Q96JY6 Y_RNA.687-201ENST00000516558 91 ntBASIC3.34□□□□□ -1.87
PDLIM2Q96JY6 RN7SKP282-201ENST00000516824 299 ntBASIC3.34□□□□□ -1.87
PDLIM2Q96JY6 AC084851.1-201ENST00000529105 249 ntBASIC3.34□□□□□ -1.87
PDLIM2Q96JY6 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.34□□□□□ -1.87
PDLIM2Q96JY6 MED28P6-201ENST00000558776 231 ntBASIC3.34□□□□□ -1.87
PDLIM2Q96JY6 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.34□□□□□ -1.87
PDLIM2Q96JY6 MIR5188-201ENST00000583467 113 ntBASIC3.34□□□□□ -1.87
PDLIM2Q96JY6 MIR3922-201ENST00000585192 84 ntBASIC3.34□□□□□ -1.87
PDLIM2Q96JY6 SNRPGP15-201ENST00000600149 222 ntBASIC3.34□□□□□ -1.87
PDLIM2Q96JY6 AC011373.1-201ENST00000607270 237 ntBASIC3.34□□□□□ -1.87
PDLIM2Q96JY6 AC062037.2-201ENST00000610137 73 ntBASIC3.34□□□□□ -1.87
PDLIM2Q96JY6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.34□□□□□ -1.87
PDLIM2Q96JY6 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
PDLIM2Q96JY6 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.87
PDLIM2Q96JY6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
PDLIM2Q96JY6 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
PDLIM2Q96JY6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
PDLIM2Q96JY6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 MIR412-201ENST00000362142 91 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 RNU6-1317P-201ENST00000364582 104 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 RNU6-384P-201ENST00000364900 104 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 MIR218-2-201ENST00000385006 110 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 U3.42-201ENST00000408746 214 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 AL592148.1-201ENST00000413568 445 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 TOMM22P1-201ENST00000418578 312 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 PGBD4P6-201ENST00000421501 610 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 OR2AQ1P-201ENST00000451972 200 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 RNU7-169P-201ENST00000459456 61 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 AC133134.1-201ENST00000466800 359 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 AC104564.1-201ENST00000493028 407 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 Vault.1-201ENST00000516474 102 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 RNU6-1256P-201ENST00000516539 103 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 SNORA40.14-201ENST00000516543 86 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 RNU7-4P-201ENST00000516961 62 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 Y_RNA.715-201ENST00000517082 110 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 AC040926.1-201ENST00000530195 238 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 AC107016.2-201ENST00000547968 190 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 CPDP1-201ENST00000579660 283 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 MIR4276-201ENST00000584832 70 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 AP000787.2-201ENST00000604432 568 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 MIR92B-201ENST00000607575 96 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 AL359198.2-201ENST00000611836 194 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 AC002076.2-201ENST00000617362 122 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 AL360181.4-201ENST00000621752 134 ntBASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.33□□□□□ -1.88
PDLIM2Q96JY6 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 RNU6-379P-201ENST00000363813 104 ntBASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 Y_RNA.245-201ENST00000364493 95 ntBASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 Y_RNA.307-201ENST00000365022 117 ntBASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 U8.8-201ENST00000365399 135 ntBASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 Y_RNA.396-201ENST00000383949 103 ntBASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 MIR521-1-201ENST00000384902 87 ntBASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 MIR449B-201ENST00000384995 97 ntBASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 EI24P1-201ENST00000416584 867 ntBASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 AC007919.1-201ENST00000429380 217 ntBASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 Z98949.2-201ENST00000440996 144 ntBASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 RPS3AP12-201ENST00000443616 753 ntBASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 FABP5P15-201ENST00000453566 214 ntBASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 snoU13.24-201ENST00000458998 104 ntBASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 AL160314.1-201ENST00000490836 438 ntBASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 HMGB1P22-201ENST00000505315 124 ntBASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 RNY3P15-201ENST00000516297 97 ntBASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 RNA5SP290-201ENST00000517133 127 ntBASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 AC006600.1-201ENST00000572529 153 ntBASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 MIR3921-201ENST00000577308 85 ntBASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 AL162713.1-201ENST00000604480 262 ntBASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PDLIM2Q96JY6 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 RNU6-874P-201ENST00000362390 105 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 RNA5SP295-201ENST00000362655 121 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 Y_RNA.533-201ENST00000384596 114 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 RNU6-713P-201ENST00000384761 107 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 MIR625-201ENST00000385047 85 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms