Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 BX510359.4-201ENST00000423750 193 ntBASIC1.61□□□□□ -2.15
ECHDC3Q96DC8 AL356583.2-201ENST00000426536 280 ntBASIC1.61□□□□□ -2.15
ECHDC3Q96DC8 CALM2P2-201ENST00000428512 440 ntBASIC1.61□□□□□ -2.15
ECHDC3Q96DC8 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.61□□□□□ -2.15
ECHDC3Q96DC8 IFNA20P-201ENST00000436840 528 ntBASIC1.61□□□□□ -2.15
ECHDC3Q96DC8 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.61□□□□□ -2.15
ECHDC3Q96DC8 AC012308.1-201ENST00000451232 178 ntBASIC1.61□□□□□ -2.15
ECHDC3Q96DC8 PRELID3BP1-201ENST00000457142 540 ntBASIC1.61□□□□□ -2.15
ECHDC3Q96DC8 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
ECHDC3Q96DC8 MTCYBP40-201ENST00000509390 1135 ntBASIC1.61□□□□□ -2.15
ECHDC3Q96DC8 Y_RNA.672-201ENST00000516289 104 ntBASIC1.61□□□□□ -2.15
ECHDC3Q96DC8 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.61□□□□□ -2.15
ECHDC3Q96DC8 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.61□□□□□ -2.15
ECHDC3Q96DC8 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.61□□□□□ -2.15
ECHDC3Q96DC8 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.61□□□□□ -2.15
ECHDC3Q96DC8 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.61□□□□□ -2.15
ECHDC3Q96DC8 AC004223.4-201ENST00000612426 332 ntBASIC1.61□□□□□ -2.15
ECHDC3Q96DC8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
ECHDC3Q96DC8 AC006026.1-201ENST00000444025 1803 ntBASIC1.61□□□□□ -2.15
ECHDC3Q96DC8 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
ECHDC3Q96DC8 RNU6-1164P-201ENST00000364428 107 ntBASIC1.6□□□□□ -2.15
ECHDC3Q96DC8 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.6□□□□□ -2.15
ECHDC3Q96DC8 SNORA17.3-201ENST00000391159 129 ntBASIC1.6□□□□□ -2.15
ECHDC3Q96DC8 BTF3L4P1-201ENST00000413813 468 ntBASIC1.6□□□□□ -2.15
ECHDC3Q96DC8 ELOCP4-201ENST00000420090 333 ntBASIC1.6□□□□□ -2.15
ECHDC3Q96DC8 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.6□□□□□ -2.15
ECHDC3Q96DC8 AC104058.1-201ENST00000448028 297 ntBASIC1.6□□□□□ -2.15
ECHDC3Q96DC8 USP9YP12-201ENST00000450481 570 ntBASIC1.6□□□□□ -2.15
ECHDC3Q96DC8 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.6□□□□□ -2.15
ECHDC3Q96DC8 AMD1P1-201ENST00000457220 922 ntBASIC1.6□□□□□ -2.15
ECHDC3Q96DC8 AC006026.2-201ENST00000457376 180 ntBASIC1.6□□□□□ -2.15
ECHDC3Q96DC8 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.6□□□□□ -2.15
ECHDC3Q96DC8 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.6□□□□□ -2.15
ECHDC3Q96DC8 RPL21P5-201ENST00000554662 472 ntBASIC1.6□□□□□ -2.15
ECHDC3Q96DC8 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.6□□□□□ -2.15
ECHDC3Q96DC8 AC027449.1-201ENST00000608890 407 ntBASIC1.6□□□□□ -2.15
ECHDC3Q96DC8 MTND4P23-201ENST00000447723 1363 ntBASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 RNU2-3P-201ENST00000410144 191 ntBASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 RNU6-387P-201ENST00000411331 105 ntBASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 OR9R1P-201ENST00000412200 877 ntBASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 SRIP3-201ENST00000413200 219 ntBASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 PGBD4P6-201ENST00000421501 610 ntBASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 AC013410.2-201ENST00000422627 201 ntBASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 EIF4EP2-201ENST00000422816 654 ntBASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 MTND4P20-201ENST00000424125 869 ntBASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 AL365400.1-201ENST00000431854 640 ntBASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 AC007969.2-201ENST00000441891 191 ntBASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 ZNF114P1-201ENST00000453500 292 ntBASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 AC087884.1-201ENST00000469738 328 ntBASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 RPL30P1-201ENST00000488676 339 ntBASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 AC005178.1-201ENST00000508392 440 ntBASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 PTP4A1P4-201ENST00000512479 322 ntBASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 RNU6-991P-201ENST00000516168 107 ntBASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 RNU6-1220P-201ENST00000517126 108 ntBASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 AL022161.1-201ENST00000604390 213 ntBASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 AC068944.2-201ENST00000610373 403 ntBASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 AL050303.3-201ENST00000613704 284 ntBASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 AC090517.3-201ENST00000625170 141 ntBASIC1.59□□□□□ -2.15
ECHDC3Q96DC8 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.59□□□□□ -2.16
ECHDC3Q96DC8 RNA5SP432-201ENST00000362480 116 ntBASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 RNU6-457P-201ENST00000363999 107 ntBASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 RNU6-169P-201ENST00000365336 107 ntBASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 SNORD14D-201ENST00000384390 87 ntBASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 MIR29B2-201ENST00000385055 81 ntBASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 RAP1BP3-201ENST00000407180 549 ntBASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 Z99497.1-201ENST00000421282 135 ntBASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 MTATP6P16-201ENST00000434543 526 ntBASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 FABP5P5-201ENST00000515537 406 ntBASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 RNU6-1129P-201ENST00000515964 104 ntBASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 SCARNA24.1-201ENST00000516465 137 ntBASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 RN7SKP219-201ENST00000516825 296 ntBASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 MIR4713-201ENST00000582691 75 ntBASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 AC073539.2-201ENST00000597113 165 ntBASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 AL136363.2-201ENST00000604173 851 ntBASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 AL121992.2-201ENST00000606262 256 ntBASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 AC131159.1-201ENST00000621854 213 ntBASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 AC007792.1-201ENST00000623023 402 ntBASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
ECHDC3Q96DC8 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 RNU6-78P-201ENST00000362897 107 ntBASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 RNU6-641P-201ENST00000384006 107 ntBASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 RNU6-997P-201ENST00000384725 107 ntBASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 RNU6-607P-201ENST00000411283 108 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms