Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AL031274.1-201ENST00000450334 232 ntBASIC2.73□□□□□ -1.97
SKA1Q96BD8 AC083798.1-201ENST00000472671 131 ntBASIC2.73□□□□□ -1.97
SKA1Q96BD8 RPL30P1-201ENST00000488676 339 ntBASIC2.73□□□□□ -1.97
SKA1Q96BD8 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.73□□□□□ -1.97
SKA1Q96BD8 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.73□□□□□ -1.97
SKA1Q96BD8 COPS8P3-201ENST00000526024 482 ntBASIC2.73□□□□□ -1.97
SKA1Q96BD8 CYCSP27-201ENST00000527643 293 ntBASIC2.73□□□□□ -1.97
SKA1Q96BD8 AC104383.1-201ENST00000530297 370 ntBASIC2.73□□□□□ -1.97
SKA1Q96BD8 MIR5583-1-201ENST00000580941 59 ntBASIC2.73□□□□□ -1.97
SKA1Q96BD8 ZNF861P-201ENST00000588126 639 ntBASIC2.73□□□□□ -1.97
SKA1Q96BD8 BNIP3P16-201ENST00000589779 534 ntBASIC2.73□□□□□ -1.97
SKA1Q96BD8 AL356575.1-201ENST00000603008 283 ntBASIC2.73□□□□□ -1.97
SKA1Q96BD8 APOOP1-201ENST00000604695 592 ntBASIC2.73□□□□□ -1.97
SKA1Q96BD8 AC097065.2-201ENST00000608159 533 ntBASIC2.73□□□□□ -1.97
SKA1Q96BD8 AL161423.1-201ENST00000613700 262 ntBASIC2.73□□□□□ -1.97
SKA1Q96BD8 Z82195.2-201ENST00000612348 18351 ntBASIC2.73□□□□□ -1.97
SKA1Q96BD8 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SKA1Q96BD8 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SKA1Q96BD8 RNU6-1085P-201ENST00000363576 107 ntBASIC2.72□□□□□ -1.97
SKA1Q96BD8 Y_RNA.194-201ENST00000363985 102 ntBASIC2.72□□□□□ -1.97
SKA1Q96BD8 SNORA25B-201ENST00000365507 128 ntBASIC2.72□□□□□ -1.97
SKA1Q96BD8 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SKA1Q96BD8 RNU6-293P-201ENST00000411259 106 ntBASIC2.72□□□□□ -1.97
SKA1Q96BD8 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.72□□□□□ -1.97
SKA1Q96BD8 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.72□□□□□ -1.97
SKA1Q96BD8 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.72□□□□□ -1.97
SKA1Q96BD8 AC112220.1-201ENST00000434628 355 ntBASIC2.72□□□□□ -1.97
SKA1Q96BD8 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SKA1Q96BD8 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.72□□□□□ -1.97
SKA1Q96BD8 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.72□□□□□ -1.97
SKA1Q96BD8 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.72□□□□□ -1.97
SKA1Q96BD8 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.72□□□□□ -1.97
SKA1Q96BD8 RN7SKP256-201ENST00000517201 314 ntBASIC2.72□□□□□ -1.97
SKA1Q96BD8 VN1R107P-201ENST00000601784 209 ntBASIC2.72□□□□□ -1.97
SKA1Q96BD8 AC124864.2-201ENST00000624736 186 ntBASIC2.72□□□□□ -1.97
SKA1Q96BD8 MIR203B-201ENST00000636080 86 ntBASIC2.72□□□□□ -1.97
SKA1Q96BD8 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
SKA1Q96BD8 U3.13-201ENST00000364804 214 ntBASIC2.71□□□□□ -1.98
SKA1Q96BD8 DEFA7P-201ENST00000382676 285 ntBASIC2.71□□□□□ -1.98
SKA1Q96BD8 MTCO3P40-201ENST00000392516 676 ntBASIC2.71□□□□□ -1.98
SKA1Q96BD8 AL591034.2-201ENST00000402839 359 ntBASIC2.71□□□□□ -1.98
SKA1Q96BD8 AL590556.1-201ENST00000423231 483 ntBASIC2.71□□□□□ -1.98
SKA1Q96BD8 TIMM9P3-201ENST00000428659 274 ntBASIC2.71□□□□□ -1.98
SKA1Q96BD8 AL121601.2-201ENST00000438019 707 ntBASIC2.71□□□□□ -1.98
SKA1Q96BD8 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.71□□□□□ -1.98
SKA1Q96BD8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.71□□□□□ -1.98
SKA1Q96BD8 USP9YP8-201ENST00000441913 500 ntBASIC2.71□□□□□ -1.98
SKA1Q96BD8 AL513328.1-201ENST00000446460 224 ntBASIC2.71□□□□□ -1.98
SKA1Q96BD8 FDX1P2-201ENST00000450769 375 ntBASIC2.71□□□□□ -1.98
SKA1Q96BD8 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.71□□□□□ -1.98
SKA1Q96BD8 RNA5SP401-201ENST00000515920 127 ntBASIC2.71□□□□□ -1.98
SKA1Q96BD8 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.71□□□□□ -1.98
SKA1Q96BD8 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.71□□□□□ -1.98
SKA1Q96BD8 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.71□□□□□ -1.98
SKA1Q96BD8 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.71□□□□□ -1.98
SKA1Q96BD8 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.71□□□□□ -1.98
SKA1Q96BD8 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.71□□□□□ -1.98
SKA1Q96BD8 MIR3945-201ENST00000581853 98 ntBASIC2.71□□□□□ -1.98
SKA1Q96BD8 AC080013.6-201ENST00000606185 215 ntBASIC2.71□□□□□ -1.98
SKA1Q96BD8 HULC.1-201ENST00000612720 240 ntBASIC2.71□□□□□ -1.98
SKA1Q96BD8 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.71□□□□□ -1.98
SKA1Q96BD8 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.7□□□□□ -1.98
SKA1Q96BD8 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SKA1Q96BD8 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SKA1Q96BD8 AC131280.1-202ENST00000624067 4211 ntBASIC2.7□□□□□ -1.98
SKA1Q96BD8 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.7□□□□□ -1.98
SKA1Q96BD8 RNU1-23P-201ENST00000363361 144 ntBASIC2.7□□□□□ -1.98
SKA1Q96BD8 RNU6-336P-201ENST00000364891 107 ntBASIC2.7□□□□□ -1.98
SKA1Q96BD8 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SKA1Q96BD8 Y_RNA.409-201ENST00000383990 98 ntBASIC2.7□□□□□ -1.98
SKA1Q96BD8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SKA1Q96BD8 RNU6-1106P-201ENST00000390845 107 ntBASIC2.7□□□□□ -1.98
SKA1Q96BD8 RNA5SP219-201ENST00000390940 113 ntBASIC2.7□□□□□ -1.98
SKA1Q96BD8 AF274854.1-201ENST00000413236 615 ntBASIC2.7□□□□□ -1.98
SKA1Q96BD8 OOSP1P1-201ENST00000423265 274 ntBASIC2.7□□□□□ -1.98
SKA1Q96BD8 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SKA1Q96BD8 AC013470.1-201ENST00000453438 462 ntBASIC2.7□□□□□ -1.98
SKA1Q96BD8 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SKA1Q96BD8 AL122001.1-201ENST00000457027 370 ntBASIC2.7□□□□□ -1.98
SKA1Q96BD8 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.7□□□□□ -1.98
SKA1Q96BD8 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.7□□□□□ -1.98
SKA1Q96BD8 RPS27P27-201ENST00000498779 255 ntBASIC2.7□□□□□ -1.98
SKA1Q96BD8 AK3P2-201ENST00000507976 429 ntBASIC2.7□□□□□ -1.98
SKA1Q96BD8 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.7□□□□□ -1.98
SKA1Q96BD8 RNU4-29P-201ENST00000515943 174 ntBASIC2.7□□□□□ -1.98
SKA1Q96BD8 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.7□□□□□ -1.98
SKA1Q96BD8 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.7□□□□□ -1.98
SKA1Q96BD8 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.7□□□□□ -1.98
SKA1Q96BD8 AC107304.1-201ENST00000604229 296 ntBASIC2.7□□□□□ -1.98
SKA1Q96BD8 AC007621.1-201ENST00000604544 437 ntBASIC2.7□□□□□ -1.98
SKA1Q96BD8 ELOCP5-201ENST00000604924 333 ntBASIC2.7□□□□□ -1.98
SKA1Q96BD8 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.7□□□□□ -1.98
SKA1Q96BD8 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
SKA1Q96BD8 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SKA1Q96BD8 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.69□□□□□ -1.98
SKA1Q96BD8 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SKA1Q96BD8 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
SKA1Q96BD8 RNU6-428P-201ENST00000362942 107 ntBASIC2.69□□□□□ -1.98
SKA1Q96BD8 RNA5SP68-201ENST00000363885 119 ntBASIC2.69□□□□□ -1.98
SKA1Q96BD8 RNU1-112P-201ENST00000364401 164 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms