Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AL358075.3-201ENST00000426289 226 ntBASIC3.39□□□□□ -1.87
HPS3Q969F9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.39□□□□□ -1.87
HPS3Q969F9 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.39□□□□□ -1.87
HPS3Q969F9 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.39□□□□□ -1.87
HPS3Q969F9 ACA59.1-201ENST00000515966 143 ntBASIC3.39□□□□□ -1.87
HPS3Q969F9 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.39□□□□□ -1.87
HPS3Q969F9 RN7SKP282-201ENST00000516824 299 ntBASIC3.39□□□□□ -1.87
HPS3Q969F9 RNU6-612P-201ENST00000516909 102 ntBASIC3.39□□□□□ -1.87
HPS3Q969F9 Y_RNA.708-201ENST00000516950 96 ntBASIC3.39□□□□□ -1.87
HPS3Q969F9 SNORA31.18-201ENST00000517043 134 ntBASIC3.39□□□□□ -1.87
HPS3Q969F9 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.39□□□□□ -1.87
HPS3Q969F9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.39□□□□□ -1.87
HPS3Q969F9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.39□□□□□ -1.87
HPS3Q969F9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.39□□□□□ -1.87
HPS3Q969F9 AC012493.2-201ENST00000595083 291 ntBASIC3.39□□□□□ -1.87
HPS3Q969F9 YPEL5P2-201ENST00000605553 359 ntBASIC3.39□□□□□ -1.87
HPS3Q969F9 AC135507.2-201ENST00000612443 309 ntBASIC3.39□□□□□ -1.87
HPS3Q969F9 AL359757.2-201ENST00000624309 274 ntBASIC3.39□□□□□ -1.87
HPS3Q969F9 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HPS3Q969F9 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
HPS3Q969F9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.39□□□□□ -1.87
HPS3Q969F9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HPS3Q969F9 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
HPS3Q969F9 AC093831.2-201ENST00000624393 3427 ntBASIC3.38□□□□□ -1.87
HPS3Q969F9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HPS3Q969F9 Y_RNA.259-201ENST00000364619 101 ntBASIC3.38□□□□□ -1.87
HPS3Q969F9 RNU6-487P-201ENST00000365430 104 ntBASIC3.38□□□□□ -1.87
HPS3Q969F9 SNORD15B-201ENST00000384714 146 ntBASIC3.38□□□□□ -1.87
HPS3Q969F9 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HPS3Q969F9 RPL21P3-201ENST00000395517 478 ntBASIC3.38□□□□□ -1.87
HPS3Q969F9 RNU4-14P-201ENST00000410858 122 ntBASIC3.38□□□□□ -1.87
HPS3Q969F9 RNU4-47P-201ENST00000410876 114 ntBASIC3.38□□□□□ -1.87
HPS3Q969F9 OSTCP8-201ENST00000445117 448 ntBASIC3.38□□□□□ -1.87
HPS3Q969F9 AC146507.2-201ENST00000460608 476 ntBASIC3.38□□□□□ -1.87
HPS3Q969F9 AC008571.1-201ENST00000467232 300 ntBASIC3.38□□□□□ -1.87
HPS3Q969F9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
HPS3Q969F9 AC008885.1-201ENST00000514930 301 ntBASIC3.38□□□□□ -1.87
HPS3Q969F9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.38□□□□□ -1.87
HPS3Q969F9 RNU5B-3P-201ENST00000516601 115 ntBASIC3.38□□□□□ -1.87
HPS3Q969F9 AP005902.1-201ENST00000521358 186 ntBASIC3.38□□□□□ -1.87
HPS3Q969F9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.38□□□□□ -1.87
HPS3Q969F9 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.38□□□□□ -1.87
HPS3Q969F9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.38□□□□□ -1.87
HPS3Q969F9 CPDP1-201ENST00000579660 283 ntBASIC3.38□□□□□ -1.87
HPS3Q969F9 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.38□□□□□ -1.87
HPS3Q969F9 MIR4513-201ENST00000581077 86 ntBASIC3.38□□□□□ -1.87
HPS3Q969F9 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.38□□□□□ -1.87
HPS3Q969F9 MIR4298-201ENST00000584380 73 ntBASIC3.38□□□□□ -1.87
HPS3Q969F9 AC018462.2-201ENST00000605375 395 ntBASIC3.38□□□□□ -1.87
HPS3Q969F9 RNU6-91P-201ENST00000607774 107 ntBASIC3.38□□□□□ -1.87
HPS3Q969F9 UCA1.1-201ENST00000620952 75 ntBASIC3.38□□□□□ -1.87
HPS3Q969F9 AC097372.5-201ENST00000623665 376 ntBASIC3.38□□□□□ -1.87
HPS3Q969F9 AC090617.7-201ENST00000623952 126 ntBASIC3.38□□□□□ -1.87
HPS3Q969F9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HPS3Q969F9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HPS3Q969F9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HPS3Q969F9 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.37□□□□□ -1.87
HPS3Q969F9 Y_RNA.460-201ENST00000384255 102 ntBASIC3.37□□□□□ -1.87
HPS3Q969F9 Y_RNA.535-201ENST00000384612 99 ntBASIC3.37□□□□□ -1.87
HPS3Q969F9 MIR521-1-201ENST00000384902 87 ntBASIC3.37□□□□□ -1.87
HPS3Q969F9 U3.26-201ENST00000391236 204 ntBASIC3.37□□□□□ -1.87
HPS3Q969F9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HPS3Q969F9 RNU6-1050P-201ENST00000410388 107 ntBASIC3.37□□□□□ -1.87
HPS3Q969F9 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.37□□□□□ -1.87
HPS3Q969F9 AC009414.1-201ENST00000427200 443 ntBASIC3.37□□□□□ -1.87
HPS3Q969F9 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.37□□□□□ -1.87
HPS3Q969F9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HPS3Q969F9 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.37□□□□□ -1.87
HPS3Q969F9 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HPS3Q969F9 SNORD5.1-201ENST00000458800 75 ntBASIC3.37□□□□□ -1.87
HPS3Q969F9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.37□□□□□ -1.87
HPS3Q969F9 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.37□□□□□ -1.87
HPS3Q969F9 RAC1P5-201ENST00000512182 576 ntBASIC3.37□□□□□ -1.87
HPS3Q969F9 RNA5SP385-201ENST00000515947 110 ntBASIC3.37□□□□□ -1.87
HPS3Q969F9 RNA5SP380-201ENST00000517190 98 ntBASIC3.37□□□□□ -1.87
HPS3Q969F9 SNORA31.23-201ENST00000517219 133 ntBASIC3.37□□□□□ -1.87
HPS3Q969F9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.37□□□□□ -1.87
HPS3Q969F9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.37□□□□□ -1.87
HPS3Q969F9 MIR5004-201ENST00000579078 107 ntBASIC3.37□□□□□ -1.87
HPS3Q969F9 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.37□□□□□ -1.87
HPS3Q969F9 MIR4325-201ENST00000583049 90 ntBASIC3.37□□□□□ -1.87
HPS3Q969F9 AC078899.3-201ENST00000599065 212 ntBASIC3.37□□□□□ -1.87
HPS3Q969F9 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.37□□□□□ -1.87
HPS3Q969F9 AC133104.2-201ENST00000615272 193 ntBASIC3.37□□□□□ -1.87
HPS3Q969F9 AC126177.8-201ENST00000618339 1015 ntBASIC3.37□□□□□ -1.87
HPS3Q969F9 AC090574.1-201ENST00000623186 233 ntBASIC3.37□□□□□ -1.87
HPS3Q969F9 AC138627.2-201ENST00000624202 601 ntBASIC3.37□□□□□ -1.87
HPS3Q969F9 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.37□□□□□ -1.87
HPS3Q969F9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HPS3Q969F9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HPS3Q969F9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.37□□□□□ -1.87
HPS3Q969F9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
HPS3Q969F9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HPS3Q969F9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HPS3Q969F9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HPS3Q969F9 RNU6-227P-201ENST00000362865 103 ntBASIC3.36□□□□□ -1.87
HPS3Q969F9 SNORA48.5-201ENST00000391143 135 ntBASIC3.36□□□□□ -1.87
HPS3Q969F9 BTF3L4P2-201ENST00000392798 346 ntBASIC3.36□□□□□ -1.87
HPS3Q969F9 MTCYBP4-201ENST00000401524 249 ntBASIC3.36□□□□□ -1.87
HPS3Q969F9 RNA5SP390-201ENST00000410191 113 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms