Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 U3.6-201ENST00000363622 211 ntBASIC3.82□□□□□ -1.8
RTF1Q92541 Y_RNA.252-201ENST00000364556 101 ntBASIC3.82□□□□□ -1.8
RTF1Q92541 AC117470.1-201ENST00000381974 330 ntBASIC3.82□□□□□ -1.8
RTF1Q92541 RNU6-639P-201ENST00000384074 107 ntBASIC3.82□□□□□ -1.8
RTF1Q92541 Y_RNA.463-201ENST00000384271 102 ntBASIC3.82□□□□□ -1.8
RTF1Q92541 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.82□□□□□ -1.8
RTF1Q92541 YPEL5P1-201ENST00000419731 367 ntBASIC3.82□□□□□ -1.8
RTF1Q92541 PGBD4P6-201ENST00000421501 610 ntBASIC3.82□□□□□ -1.8
RTF1Q92541 AL133396.1-201ENST00000432048 687 ntBASIC3.82□□□□□ -1.8
RTF1Q92541 AC092573.2-201ENST00000434546 243 ntBASIC3.82□□□□□ -1.8
RTF1Q92541 RPL37P4-201ENST00000448908 268 ntBASIC3.82□□□□□ -1.8
RTF1Q92541 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.82□□□□□ -1.8
RTF1Q92541 SNORA59A-201ENST00000459326 152 ntBASIC3.82□□□□□ -1.8
RTF1Q92541 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.82□□□□□ -1.8
RTF1Q92541 RN7SL633P-201ENST00000488974 297 ntBASIC3.82□□□□□ -1.8
RTF1Q92541 AC010265.1-201ENST00000513509 211 ntBASIC3.82□□□□□ -1.8
RTF1Q92541 RNU6-470P-201ENST00000515954 104 ntBASIC3.82□□□□□ -1.8
RTF1Q92541 RNA5SP367-201ENST00000516557 118 ntBASIC3.82□□□□□ -1.8
RTF1Q92541 AC109479.2-201ENST00000517842 174 ntBASIC3.82□□□□□ -1.8
RTF1Q92541 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.82□□□□□ -1.8
RTF1Q92541 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.82□□□□□ -1.8
RTF1Q92541 TRAV32-201ENST00000553993 340 ntBASIC3.82□□□□□ -1.8
RTF1Q92541 CPDP1-201ENST00000579660 283 ntBASIC3.82□□□□□ -1.8
RTF1Q92541 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RTF1Q92541 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.82□□□□□ -1.8
RTF1Q92541 AC096644.4-201ENST00000563417 2912 ntBASIC3.82□□□□□ -1.8
RTF1Q92541 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.82□□□□□ -1.8
RTF1Q92541 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RTF1Q92541 MTND5P30-201ENST00000452896 1731 ntBASIC3.81□□□□□ -1.8
RTF1Q92541 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.81□□□□□ -1.8
RTF1Q92541 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
RTF1Q92541 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.81□□□□□ -1.8
RTF1Q92541 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTF1Q92541 MIR148B-201ENST00000362252 99 ntBASIC3.81□□□□□ -1.8
RTF1Q92541 Y_RNA.2-201ENST00000362330 96 ntBASIC3.81□□□□□ -1.8
RTF1Q92541 Y_RNA.145-201ENST00000363527 102 ntBASIC3.81□□□□□ -1.8
RTF1Q92541 RNU6-842P-201ENST00000384269 107 ntBASIC3.81□□□□□ -1.8
RTF1Q92541 SNORA41-201ENST00000384675 132 ntBASIC3.81□□□□□ -1.8
RTF1Q92541 RPS15AP10-201ENST00000432472 382 ntBASIC3.81□□□□□ -1.8
RTF1Q92541 FTH1P25-201ENST00000447665 469 ntBASIC3.81□□□□□ -1.8
RTF1Q92541 MTATP6P7-201ENST00000453315 681 ntBASIC3.81□□□□□ -1.8
RTF1Q92541 HMGN2P16-201ENST00000456802 261 ntBASIC3.81□□□□□ -1.8
RTF1Q92541 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.81□□□□□ -1.8
RTF1Q92541 RNU1-61P-201ENST00000516107 151 ntBASIC3.81□□□□□ -1.8
RTF1Q92541 AP000889.1-201ENST00000530968 660 ntBASIC3.81□□□□□ -1.8
RTF1Q92541 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.81□□□□□ -1.8
RTF1Q92541 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.81□□□□□ -1.8
RTF1Q92541 AC008121.1-201ENST00000603244 268 ntBASIC3.81□□□□□ -1.8
RTF1Q92541 U2.21-201ENST00000637295 81 ntBASIC3.81□□□□□ -1.8
RTF1Q92541 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTF1Q92541 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.81□□□□□ -1.8
RTF1Q92541 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.81□□□□□ -1.8
RTF1Q92541 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RTF1Q92541 FAM35BP-202ENST00000497389 3337 ntBASIC3.8□□□□□ -1.8
RTF1Q92541 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RTF1Q92541 RNU6-490P-201ENST00000362985 107 ntBASIC3.8□□□□□ -1.8
RTF1Q92541 RNU6-1059P-201ENST00000363752 98 ntBASIC3.8□□□□□ -1.8
RTF1Q92541 Y_RNA.510-201ENST00000384511 114 ntBASIC3.8□□□□□ -1.8
RTF1Q92541 SNORA46-201ENST00000384762 135 ntBASIC3.8□□□□□ -1.8
RTF1Q92541 RNU6-308P-201ENST00000390957 107 ntBASIC3.8□□□□□ -1.8
RTF1Q92541 RNU6-325P-201ENST00000411132 105 ntBASIC3.8□□□□□ -1.8
RTF1Q92541 TMEM167AP1-201ENST00000423409 219 ntBASIC3.8□□□□□ -1.8
RTF1Q92541 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.8□□□□□ -1.8
RTF1Q92541 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RTF1Q92541 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.8□□□□□ -1.8
RTF1Q92541 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.8□□□□□ -1.8
RTF1Q92541 AC008571.1-201ENST00000467232 300 ntBASIC3.8□□□□□ -1.8
RTF1Q92541 RPL23AP45-201ENST00000476406 468 ntBASIC3.8□□□□□ -1.8
RTF1Q92541 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.8□□□□□ -1.8
RTF1Q92541 PTP4A1P4-201ENST00000512479 322 ntBASIC3.8□□□□□ -1.8
RTF1Q92541 AC091826.1-201ENST00000514065 313 ntBASIC3.8□□□□□ -1.8
RTF1Q92541 RNA5SP384-201ENST00000516615 116 ntBASIC3.8□□□□□ -1.8
RTF1Q92541 RN7SKP295-201ENST00000517264 153 ntBASIC3.8□□□□□ -1.8
RTF1Q92541 AC109446.1-201ENST00000566172 220 ntBASIC3.8□□□□□ -1.8
RTF1Q92541 MIR4782-201ENST00000577987 79 ntBASIC3.8□□□□□ -1.8
RTF1Q92541 AL121917.1-203ENST00000605534 577 ntBASIC3.8□□□□□ -1.8
RTF1Q92541 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.8□□□□□ -1.8
RTF1Q92541 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.8□□□□□ -1.8
RTF1Q92541 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RTF1Q92541 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RTF1Q92541 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.8□□□□□ -1.8
RTF1Q92541 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RTF1Q92541 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.79□□□□□ -1.8
RTF1Q92541 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.79□□□□□ -1.8
RTF1Q92541 MTND5P27-201ENST00000428871 1720 ntBASIC3.79□□□□□ -1.8
RTF1Q92541 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.79□□□□□ -1.8
RTF1Q92541 RNU6-933P-201ENST00000384424 107 ntBASIC3.79□□□□□ -1.8
RTF1Q92541 RNU6-790P-201ENST00000384479 105 ntBASIC3.79□□□□□ -1.8
RTF1Q92541 RNU6-174P-201ENST00000410406 106 ntBASIC3.79□□□□□ -1.8
RTF1Q92541 AL117339.3-201ENST00000418733 162 ntBASIC3.79□□□□□ -1.8
RTF1Q92541 AC093151.1-201ENST00000427711 313 ntBASIC3.79□□□□□ -1.8
RTF1Q92541 RPL21P40-201ENST00000428586 483 ntBASIC3.79□□□□□ -1.8
RTF1Q92541 AC013470.1-201ENST00000453438 462 ntBASIC3.79□□□□□ -1.8
RTF1Q92541 AP002884.2-201ENST00000471647 395 ntBASIC3.79□□□□□ -1.8
RTF1Q92541 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.79□□□□□ -1.8
RTF1Q92541 SCARNA16.2-201ENST00000516520 172 ntBASIC3.79□□□□□ -1.8
RTF1Q92541 AC245166.1-201ENST00000521012 253 ntBASIC3.79□□□□□ -1.8
RTF1Q92541 AC023442.1-201ENST00000531247 422 ntBASIC3.79□□□□□ -1.8
RTF1Q92541 GTF3AP2-201ENST00000557014 266 ntBASIC3.79□□□□□ -1.8
RTF1Q92541 ELOCP29-201ENST00000588193 334 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms