Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 RNU4-24P-201ENST00000364565 139 ntBASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 RNA5SP390-201ENST00000410191 113 ntBASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 RPS15AP28-201ENST00000435088 386 ntBASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 FDX1P2-201ENST00000450769 375 ntBASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 SRRM1P2-201ENST00000464531 1192 ntBASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 AC107401.1-201ENST00000503426 685 ntBASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 RNU6-377P-201ENST00000515965 102 ntBASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 SNORA40.12-201ENST00000516329 111 ntBASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 AC109329.1-201ENST00000518744 317 ntBASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 MTND4P7-201ENST00000523876 130 ntBASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 AP003034.1-201ENST00000534621 422 ntBASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 AC023050.3-201ENST00000541142 333 ntBASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 MIR4513-201ENST00000581077 86 ntBASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 U2.17-201ENST00000611454 95 ntBASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 U4atac.1-201ENST00000618345 95 ntBASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 AC068792.1-201ENST00000621354 417 ntBASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 MIR6766-201ENST00000622641 72 ntBASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 U4.7-201ENST00000638126 106 ntBASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CKAP2Q8WWK9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 RNU6-266P-201ENST00000364225 107 ntBASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 RNU6-301P-201ENST00000384277 107 ntBASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 AL161788.1-201ENST00000441805 169 ntBASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 CYP2C59P-201ENST00000457790 269 ntBASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 RNU7-167P-201ENST00000459160 62 ntBASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 RPL9P6-201ENST00000492764 598 ntBASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 SNORA25.17-201ENST00000517184 124 ntBASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 AP001893.2-201ENST00000526949 202 ntBASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 AC104383.1-201ENST00000530297 370 ntBASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 AC103987.3-201ENST00000582071 292 ntBASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 SNORD14A-201ENST00000606526 91 ntBASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 AP001330.5-201ENST00000607176 411 ntBASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 Z82243.1-201ENST00000609432 473 ntBASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 AC093783.1-201ENST00000612976 329 ntBASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 AC124864.2-201ENST00000624736 186 ntBASIC2.27□□□□□ -2.05
CKAP2Q8WWK9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 RNA5SP240-201ENST00000365355 128 ntBASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 Y_RNA.517-201ENST00000384551 106 ntBASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 MTCO3P40-201ENST00000392516 676 ntBASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 RNU2-23P-201ENST00000410545 195 ntBASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 SNORD56-201ENST00000413522 71 ntBASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 AC018634.1-201ENST00000437554 401 ntBASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 AL121601.2-201ENST00000438019 707 ntBASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 AC124916.1-201ENST00000444020 547 ntBASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 AC022880.1-201ENST00000534017 973 ntBASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 MTCO3P23-201ENST00000561363 289 ntBASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 AC093249.1-201ENST00000567049 203 ntBASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 MIR5002-201ENST00000584713 97 ntBASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 AC103810.6-201ENST00000606708 136 ntBASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 AC073534.2-201ENST00000620377 381 ntBASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 AC007792.1-201ENST00000623023 402 ntBASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CKAP2Q8WWK9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CKAP2Q8WWK9 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CKAP2Q8WWK9 Y_RNA.40-201ENST00000362645 93 ntBASIC2.25□□□□□ -2.05
CKAP2Q8WWK9 RNU6-655P-201ENST00000362858 107 ntBASIC2.25□□□□□ -2.05
CKAP2Q8WWK9 RNU6-1085P-201ENST00000363576 107 ntBASIC2.25□□□□□ -2.05
CKAP2Q8WWK9 RNU6-1322P-201ENST00000364309 107 ntBASIC2.25□□□□□ -2.05
CKAP2Q8WWK9 Y_RNA.399-201ENST00000383955 105 ntBASIC2.25□□□□□ -2.05
CKAP2Q8WWK9 MIR544A-201ENST00000384855 91 ntBASIC2.25□□□□□ -2.05
CKAP2Q8WWK9 CALM2P3-201ENST00000400429 449 ntBASIC2.25□□□□□ -2.05
CKAP2Q8WWK9 RNA5SP338-201ENST00000410495 85 ntBASIC2.25□□□□□ -2.05
CKAP2Q8WWK9 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.25□□□□□ -2.05
CKAP2Q8WWK9 MORF4L1P6-201ENST00000418771 268 ntBASIC2.25□□□□□ -2.05
CKAP2Q8WWK9 AIMP1P2-201ENST00000425294 312 ntBASIC2.25□□□□□ -2.05
CKAP2Q8WWK9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.25□□□□□ -2.05
CKAP2Q8WWK9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.25□□□□□ -2.05
CKAP2Q8WWK9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms