Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AL670379.8-201ENST00000605353 252 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 AL670379.7-201ENST00000605823 252 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 U7.8-201ENST00000619968 63 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 AL360181.4-201ENST00000621752 134 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 AL391987.6-201ENST00000305671 199 ntBASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 Y_RNA.277-201ENST00000364754 102 ntBASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 Y_RNA.352-201ENST00000365439 102 ntBASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 SNORA7.4-201ENST00000384249 137 ntBASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 RNA5SP111-201ENST00000411386 101 ntBASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 RPL23AP22-201ENST00000437556 453 ntBASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 FABP5P13-201ENST00000452144 328 ntBASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 Y_RNA.644-201ENST00000459006 113 ntBASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 RNU7-120P-201ENST00000459334 63 ntBASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 AC107393.1-201ENST00000512403 346 ntBASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 Y_RNA.674-201ENST00000516362 113 ntBASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 RN7SKP289-201ENST00000517244 295 ntBASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 ERHP1-201ENST00000523006 310 ntBASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 TGIF1P1-201ENST00000558095 802 ntBASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 AL355877.2-201ENST00000603670 358 ntBASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 AL158032.1-201ENST00000605401 106 ntBASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 MIR1244-1-201ENST00000612829 85 ntBASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 uc_338.25-201ENST00000613756 156 ntBASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 SNHG22-203ENST00000617833 660 ntBASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 MIR1244-3-201ENST00000635744 85 ntBASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 MIR1244-2-201ENST00000636449 85 ntBASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 MIR1244-4-202ENST00000636813 85 ntBASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
SH3RF3Q8TEJ3 AP000560.1-201ENST00000624150 1937 ntBASIC3.8□□□□□ -1.8
SH3RF3Q8TEJ3 RNU6-682P-201ENST00000363843 106 ntBASIC3.8□□□□□ -1.8
SH3RF3Q8TEJ3 RNU6-701P-201ENST00000384059 107 ntBASIC3.8□□□□□ -1.8
SH3RF3Q8TEJ3 RNU6-378P-201ENST00000384324 107 ntBASIC3.8□□□□□ -1.8
SH3RF3Q8TEJ3 AP000567.1-201ENST00000406413 156 ntBASIC3.8□□□□□ -1.8
SH3RF3Q8TEJ3 MIR1298-201ENST00000408783 112 ntBASIC3.8□□□□□ -1.8
SH3RF3Q8TEJ3 RNU4-65P-201ENST00000410473 140 ntBASIC3.8□□□□□ -1.8
SH3RF3Q8TEJ3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.8□□□□□ -1.8
SH3RF3Q8TEJ3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SH3RF3Q8TEJ3 RNU7-138P-201ENST00000459479 64 ntBASIC3.8□□□□□ -1.8
SH3RF3Q8TEJ3 RPL23AP62-201ENST00000463396 453 ntBASIC3.8□□□□□ -1.8
SH3RF3Q8TEJ3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.8□□□□□ -1.8
SH3RF3Q8TEJ3 AC008885.1-201ENST00000514930 301 ntBASIC3.8□□□□□ -1.8
SH3RF3Q8TEJ3 SNORA31.6-201ENST00000516241 130 ntBASIC3.8□□□□□ -1.8
SH3RF3Q8TEJ3 Y_RNA.689-201ENST00000516589 107 ntBASIC3.8□□□□□ -1.8
SH3RF3Q8TEJ3 AC104576.1-201ENST00000524225 88 ntBASIC3.8□□□□□ -1.8
SH3RF3Q8TEJ3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SH3RF3Q8TEJ3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.8□□□□□ -1.8
SH3RF3Q8TEJ3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 AF117829.1-206ENST00000621883 3802 ntBASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 AC002546.1-201ENST00000588041 2504 ntBASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 RNU6-371P-201ENST00000364283 108 ntBASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 RNU6-1074P-201ENST00000383995 104 ntBASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 RNU6-48P-201ENST00000384161 107 ntBASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 RNU6-45P-201ENST00000384471 107 ntBASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 RNU6-14P-201ENST00000384630 106 ntBASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 SNORD73A-201ENST00000386062 65 ntBASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 UBA52P6-201ENST00000399822 382 ntBASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 CST9LP2-201ENST00000437612 320 ntBASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 AP001486.1-201ENST00000463339 476 ntBASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 AC010631.1-201ENST00000474150 156 ntBASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 MLLT10P2-201ENST00000506434 249 ntBASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 RNU1-61P-201ENST00000516107 151 ntBASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 Y_RNA.687-201ENST00000516558 91 ntBASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 DEFB108E-201ENST00000524692 240 ntBASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 AL451007.1-201ENST00000595491 289 ntBASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 AL158827.2-201ENST00000602494 330 ntBASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 AC007998.5-201ENST00000622938 237 ntBASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 AL691447.3-201ENST00000635020 330 ntBASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SH3RF3Q8TEJ3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SH3RF3Q8TEJ3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms