Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 AF127577.6-201ENST00000623352 2191 ntBASIC3.11□□□□□ -1.91
SFTPA1Q8IWL2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SFTPA1Q8IWL2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SFTPA1Q8IWL2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 AC073325.2-201ENST00000339545 159 ntBASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 Y_RNA.252-201ENST00000364556 101 ntBASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 RNU6-596P-201ENST00000365395 98 ntBASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 Y_RNA.364-201ENST00000365532 101 ntBASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 Y_RNA.428-201ENST00000384078 102 ntBASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 Y_RNA.459-201ENST00000384251 102 ntBASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 Y_RNA.533-201ENST00000384596 114 ntBASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 SNORA1.3-201ENST00000384676 136 ntBASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 AC008267.5-201ENST00000424928 265 ntBASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 SETP5-201ENST00000437270 562 ntBASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 RPL30P14-201ENST00000482744 348 ntBASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 SNORA43.2-201ENST00000516652 128 ntBASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 SNORD116.3-201ENST00000517176 78 ntBASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 AP004607.1-201ENST00000524456 203 ntBASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 AL391261.3-201ENST00000557194 520 ntBASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 HMGB1P24-202ENST00000615653 685 ntBASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 MIR6076-201ENST00000617521 113 ntBASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SFTPA1Q8IWL2 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 AC007496.3-201ENST00000624987 3443 ntBASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 RNU6-527P-201ENST00000363425 104 ntBASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 Y_RNA.145-201ENST00000363527 102 ntBASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 U3.6-201ENST00000363622 211 ntBASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 RNU6-99P-201ENST00000364721 107 ntBASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 SNORA18.3-201ENST00000384122 132 ntBASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 NDUFS5P4-201ENST00000412983 318 ntBASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 AC022018.1-201ENST00000430685 241 ntBASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 AL590664.1-201ENST00000448065 339 ntBASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 AC128713.1-201ENST00000471495 306 ntBASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 RPL23AP49-201ENST00000492925 468 ntBASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 AC105758.1-201ENST00000506038 399 ntBASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 SNORA25.10-201ENST00000515926 124 ntBASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 RNU6-581P-201ENST00000516214 105 ntBASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 GTF3AP2-201ENST00000557014 266 ntBASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 AL158827.2-201ENST00000602494 330 ntBASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 AP001836.1-201ENST00000604675 523 ntBASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 AC005014.2-201ENST00000607795 599 ntBASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 AC005046.1-201ENST00000608515 625 ntBASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 AC091925.1-201ENST00000623204 462 ntBASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 AL691447.3-201ENST00000635020 330 ntBASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SFTPA1Q8IWL2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.09□□□□□ -1.92
SFTPA1Q8IWL2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
SFTPA1Q8IWL2 AL353746.1-201ENST00000566293 6881 ntBASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 RNU6-942P-201ENST00000363002 107 ntBASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 RNU6-1032P-201ENST00000384100 107 ntBASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 MIR3074-201ENST00000384885 81 ntBASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 MRPL42P3-201ENST00000401492 326 ntBASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 Z98941.1-201ENST00000407764 100 ntBASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 RPL23AP14-201ENST00000468281 468 ntBASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 RPL17P19-201ENST00000489069 552 ntBASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 RNA5SP356-201ENST00000515972 94 ntBASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 RNU1-143P-201ENST00000516296 146 ntBASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 RNU6-1046P-201ENST00000516538 107 ntBASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 RN7SKP272-201ENST00000516988 232 ntBASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 AC010186.2-204ENST00000537668 439 ntBASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 AC010653.1-201ENST00000571108 881 ntBASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 MIR4513-201ENST00000581077 86 ntBASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 HMGN2P15-201ENST00000585707 270 ntBASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 AC092447.9-201ENST00000603395 144 ntBASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 AC136443.5-201ENST00000603741 370 ntBASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 U1.23-201ENST00000610293 146 ntBASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 MIR8076-201ENST00000611401 83 ntBASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 RNU1-68P-201ENST00000615382 146 ntBASIC3.08□□□□□ -1.92
SFTPA1Q8IWL2 AC007318.2-201ENST00000620999 243 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms