Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RNU6-78P-201ENST00000362897 107 ntBASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 RNU6-282P-201ENST00000365357 103 ntBASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 SNORA40.18-201ENST00000391200 128 ntBASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 RNU2-23P-201ENST00000410545 195 ntBASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 MTND3P17-201ENST00000416968 344 ntBASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 snoU109.1-201ENST00000459339 135 ntBASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 RPL23AP63-201ENST00000498752 471 ntBASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 AC092436.1-201ENST00000506450 503 ntBASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 SNORA18.6-201ENST00000516792 115 ntBASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 RNU6-410P-201ENST00000517006 107 ntBASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 RMST_4.1-201ENST00000616886 107 ntBASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 AL603755.1-201ENST00000619504 163 ntBASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.85□□□□□ -2.11
CCDC50Q8IVM0 RNU6-1159P-201ENST00000362933 107 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 RNA5SP126-201ENST00000365092 109 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 RNU6-45P-201ENST00000384471 107 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 RNU6-997P-201ENST00000384725 107 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 RNY3P10-201ENST00000384764 102 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 MIR518A2-201ENST00000384966 87 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 RNU4-26P-201ENST00000410270 107 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 RNU6-248P-201ENST00000410720 107 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 RNU2-32P-201ENST00000411193 191 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 RNA5SP450-201ENST00000411206 102 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 RNU6-607P-201ENST00000411283 108 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 AL365400.1-201ENST00000431854 640 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 GPR143P-201ENST00000434155 205 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 SNRPFP4-201ENST00000456366 242 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 MTND3P7-201ENST00000474435 343 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 MTCYBP40-201ENST00000509390 1135 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 AC107393.1-201ENST00000512403 346 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 RNU6-965P-201ENST00000516721 96 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 NDUFA5P6-201ENST00000542110 379 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 MIR4775-201ENST00000581168 75 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 MIR3682-201ENST00000581338 84 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 SEPT7P9-203ENST00000604116 343 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 U6.114-201ENST00000636407 96 ntBASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC50Q8IVM0 FARSBP1-201ENST00000435808 1778 ntBASIC1.84□□□□□ -2.12
CCDC50Q8IVM0 MTND5P17-201ENST00000418405 1603 ntBASIC1.84□□□□□ -2.12
CCDC50Q8IVM0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 RNU6-1287P-201ENST00000362914 107 ntBASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 U3.4-201ENST00000363352 213 ntBASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 RNU6-1210P-201ENST00000363775 107 ntBASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 RNA5SP363-201ENST00000365072 115 ntBASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 RNU6-715P-201ENST00000365204 103 ntBASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 RNU6-1060P-201ENST00000384664 107 ntBASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 RNA5SP390-201ENST00000410191 113 ntBASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 AL645568.3-201ENST00000433683 316 ntBASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 AL031667.1-201ENST00000440222 725 ntBASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 RPL23AP3-201ENST00000453844 468 ntBASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 AL122001.1-201ENST00000457027 370 ntBASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 RPS29P15-201ENST00000458329 171 ntBASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 SNORD42A-201ENST00000459584 64 ntBASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 AC006512.1-201ENST00000468816 291 ntBASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 RNU6-1178P-201ENST00000516674 107 ntBASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 AP000763.2-201ENST00000540641 163 ntBASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 MIR3913-1-201ENST00000577744 102 ntBASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 MIR4299-201ENST00000577899 72 ntBASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 MIR8081-201ENST00000611533 95 ntBASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 AC063943.3-201ENST00000615562 356 ntBASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 AC005296.1-201ENST00000616145 209 ntBASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC50Q8IVM0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 AC092881.1-201ENST00000638218 2733 ntBASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 FGF7P2-201ENST00000332473 296 ntBASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 SNORD48-201ENST00000364953 64 ntBASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 SNORA70B-201ENST00000384210 135 ntBASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 MIR9-3-201ENST00000385084 90 ntBASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 CBX3P9-201ENST00000402326 552 ntBASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 MIR1262-201ENST00000408276 93 ntBASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 RNU6-387P-201ENST00000411331 105 ntBASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 BTF3L4P1-201ENST00000413813 468 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms