Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC0.7□□□□□ -2.3
LCA10Q71F78 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.7□□□□□ -2.3
LCA10Q71F78 RPL39P28-201ENST00000465655 155 ntBASIC0.7□□□□□ -2.3
LCA10Q71F78 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.7□□□□□ -2.3
LCA10Q71F78 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.7□□□□□ -2.3
LCA10Q71F78 AC021146.8-201ENST00000507455 733 ntBASIC0.7□□□□□ -2.3
LCA10Q71F78 AC005741.1-201ENST00000511094 432 ntBASIC0.7□□□□□ -2.3
LCA10Q71F78 AC109445.1-201ENST00000512356 383 ntBASIC0.7□□□□□ -2.3
LCA10Q71F78 Y_RNA.687-201ENST00000516558 91 ntBASIC0.7□□□□□ -2.3
LCA10Q71F78 SNORD60.2-201ENST00000516883 86 ntBASIC0.7□□□□□ -2.3
LCA10Q71F78 RNA5SP437-201ENST00000517249 129 ntBASIC0.7□□□□□ -2.3
LCA10Q71F78 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.7□□□□□ -2.3
LCA10Q71F78 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
LCA10Q71F78 AC027807.1-201ENST00000559921 996 ntBASIC0.7□□□□□ -2.3
LCA10Q71F78 AC009712.1-201ENST00000564938 316 ntBASIC0.7□□□□□ -2.3
LCA10Q71F78 AC015720.1-201ENST00000565251 277 ntBASIC0.7□□□□□ -2.3
LCA10Q71F78 MZT1P2-201ENST00000604387 248 ntBASIC0.7□□□□□ -2.3
LCA10Q71F78 AC069114.2-201ENST00000604699 304 ntBASIC0.7□□□□□ -2.3
LCA10Q71F78 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.7□□□□□ -2.3
LCA10Q71F78 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.7□□□□□ -2.3
LCA10Q71F78 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.7□□□□□ -2.3
LCA10Q71F78 AC027335.2-201ENST00000624030 375 ntBASIC0.7□□□□□ -2.3
LCA10Q71F78 AC010615.1-201ENST00000594254 1764 ntBASIC0.7□□□□□ -2.3
LCA10Q71F78 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
LCA10Q71F78 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
LCA10Q71F78 U8.1-201ENST00000362843 134 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 SNORD32B-201ENST00000364460 84 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
LCA10Q71F78 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
LCA10Q71F78 RNU6-946P-201ENST00000383878 107 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 SNORA25-201ENST00000384384 134 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 SNORA26.9-201ENST00000391322 122 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 TXNL1P1-201ENST00000429528 554 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.69□□□□□ -2.3
LCA10Q71F78 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.69□□□□□ -2.3
LCA10Q71F78 SNORD13-201ENST00000459299 104 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 snoU13.15-201ENST00000459407 104 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 RN7SL429P-201ENST00000479090 223 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 RN7SL489P-201ENST00000486185 223 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 RN7SL327P-201ENST00000488659 223 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.69□□□□□ -2.3
LCA10Q71F78 AC112206.3-201ENST00000514578 389 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 MIR449C-201ENST00000516047 92 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 RNU1-41P-201ENST00000516161 162 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 RNU1-48P-201ENST00000516400 162 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 RNU5A-4P-201ENST00000516588 111 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.69□□□□□ -2.3
LCA10Q71F78 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.69□□□□□ -2.3
LCA10Q71F78 AC090821.2-201ENST00000523552 176 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.69□□□□□ -2.3
LCA10Q71F78 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.69□□□□□ -2.3
LCA10Q71F78 AC136932.1-201ENST00000574771 208 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.69□□□□□ -2.3
LCA10Q71F78 MIR3683-201ENST00000580847 82 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 AL391646.1-201ENST00000603860 190 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 BX284668.6-201ENST00000606899 438 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.69□□□□□ -2.3
LCA10Q71F78 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 RN7SL853P-201ENST00000617250 223 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.69□□□□□ -2.3
LCA10Q71F78 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
LCA10Q71F78 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
LCA10Q71F78 RNU6-60P-201ENST00000364792 103 ntBASIC0.68□□□□□ -2.3
LCA10Q71F78 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
LCA10Q71F78 RPS3AP36-201ENST00000398190 775 ntBASIC0.68□□□□□ -2.3
LCA10Q71F78 RNU2-62P-201ENST00000410868 191 ntBASIC0.68□□□□□ -2.3
LCA10Q71F78 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.68□□□□□ -2.3
LCA10Q71F78 MTND1P30-201ENST00000441241 901 ntBASIC0.68□□□□□ -2.3
LCA10Q71F78 PRPS1P1-201ENST00000445305 876 ntBASIC0.68□□□□□ -2.3
LCA10Q71F78 RPS29P28-201ENST00000446439 141 ntBASIC0.68□□□□□ -2.3
LCA10Q71F78 AL122001.1-201ENST00000457027 370 ntBASIC0.68□□□□□ -2.3
LCA10Q71F78 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.68□□□□□ -2.3
LCA10Q71F78 Y_RNA.689-201ENST00000516589 107 ntBASIC0.68□□□□□ -2.3
LCA10Q71F78 RN7SKP88-201ENST00000516847 250 ntBASIC0.68□□□□□ -2.3
LCA10Q71F78 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.68□□□□□ -2.3
LCA10Q71F78 BNIP3P6-201ENST00000549284 499 ntBASIC0.68□□□□□ -2.3
LCA10Q71F78 MIR3945-201ENST00000581853 98 ntBASIC0.68□□□□□ -2.3
LCA10Q71F78 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.68□□□□□ -2.3
LCA10Q71F78 AL590229.1-201ENST00000603497 542 ntBASIC0.68□□□□□ -2.3
LCA10Q71F78 AL020996.3-201ENST00000606617 222 ntBASIC0.68□□□□□ -2.3
LCA10Q71F78 7SK.8-201ENST00000612110 250 ntBASIC0.68□□□□□ -2.3
LCA10Q71F78 7SK.11-201ENST00000615477 250 ntBASIC0.68□□□□□ -2.3
LCA10Q71F78 U6.42-201ENST00000618440 107 ntBASIC0.68□□□□□ -2.3
LCA10Q71F78 7SK.13-201ENST00000622040 250 ntBASIC0.68□□□□□ -2.3
LCA10Q71F78 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.68□□□□□ -2.3
LCA10Q71F78 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC0.68□□□□□ -2.3
LCA10Q71F78 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.67□□□□□ -2.3
LCA10Q71F78 MIR340-201ENST00000362125 95 ntBASIC0.67□□□□□ -2.3
LCA10Q71F78 RNU4-13P-201ENST00000364019 141 ntBASIC0.67□□□□□ -2.3
LCA10Q71F78 RNU5E-6P-201ENST00000365574 115 ntBASIC0.67□□□□□ -2.3
LCA10Q71F78 RNU6-203P-201ENST00000384038 104 ntBASIC0.67□□□□□ -2.3
LCA10Q71F78 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.67□□□□□ -2.3
LCA10Q71F78 POLR2J4-204ENST00000418424 324 ntBASIC0.67□□□□□ -2.3
LCA10Q71F78 AC013410.2-201ENST00000422627 201 ntBASIC0.67□□□□□ -2.3
LCA10Q71F78 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.67□□□□□ -2.3
LCA10Q71F78 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.67□□□□□ -2.3
LCA10Q71F78 AC245047.4-201ENST00000433189 144 ntBASIC0.67□□□□□ -2.3
LCA10Q71F78 AL121890.1-201ENST00000435457 205 ntBASIC0.67□□□□□ -2.3
LCA10Q71F78 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms