Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AL159153.1-201ENST00000619688 317 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.14□□□□□ -1.91
RNF220Q5VTB9 AC009093.8-201ENST00000641769 292 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
RNF220Q5VTB9 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.14□□□□□ -1.91
RNF220Q5VTB9 Y_RNA.2-201ENST00000362330 96 ntBASIC3.13□□□□□ -1.91
RNF220Q5VTB9 RNA5SP124-201ENST00000362739 110 ntBASIC3.13□□□□□ -1.91
RNF220Q5VTB9 Y_RNA.123-201ENST00000363338 102 ntBASIC3.13□□□□□ -1.91
RNF220Q5VTB9 RNU6-1285P-201ENST00000363480 105 ntBASIC3.13□□□□□ -1.91
RNF220Q5VTB9 RNU6-1059P-201ENST00000363752 98 ntBASIC3.13□□□□□ -1.91
RNF220Q5VTB9 RNU6-1188P-201ENST00000363795 107 ntBASIC3.13□□□□□ -1.91
RNF220Q5VTB9 U8.9-201ENST00000365667 134 ntBASIC3.13□□□□□ -1.91
RNF220Q5VTB9 RNU6-842P-201ENST00000384269 107 ntBASIC3.13□□□□□ -1.91
RNF220Q5VTB9 RNU6-784P-201ENST00000384330 106 ntBASIC3.13□□□□□ -1.91
RNF220Q5VTB9 RNU1-57P-201ENST00000384491 166 ntBASIC3.13□□□□□ -1.91
RNF220Q5VTB9 MTCYBP4-201ENST00000401524 249 ntBASIC3.13□□□□□ -1.91
RNF220Q5VTB9 RNU6-174P-201ENST00000410406 106 ntBASIC3.13□□□□□ -1.91
RNF220Q5VTB9 RN7SKP61-201ENST00000410642 295 ntBASIC3.13□□□□□ -1.91
RNF220Q5VTB9 EIF1AXP1-201ENST00000419267 435 ntBASIC3.13□□□□□ -1.91
RNF220Q5VTB9 EIF4EP2-201ENST00000422816 654 ntBASIC3.13□□□□□ -1.91
RNF220Q5VTB9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.13□□□□□ -1.91
RNF220Q5VTB9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.13□□□□□ -1.91
RNF220Q5VTB9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.13□□□□□ -1.91
RNF220Q5VTB9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.13□□□□□ -1.91
RNF220Q5VTB9 AC106785.1-201ENST00000565935 262 ntBASIC3.13□□□□□ -1.91
RNF220Q5VTB9 AC103810.1-201ENST00000579873 453 ntBASIC3.13□□□□□ -1.91
RNF220Q5VTB9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.13□□□□□ -1.91
RNF220Q5VTB9 MIR7157-201ENST00000635801 60 ntBASIC3.13□□□□□ -1.91
RNF220Q5VTB9 MTND4LP32-201ENST00000636111 270 ntBASIC3.13□□□□□ -1.91
RNF220Q5VTB9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RNF220Q5VTB9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.13□□□□□ -1.91
RNF220Q5VTB9 AC138915.1-201ENST00000565427 1685 ntBASIC3.13□□□□□ -1.91
RNF220Q5VTB9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
RNF220Q5VTB9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.13□□□□□ -1.91
RNF220Q5VTB9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNF220Q5VTB9 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNF220Q5VTB9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RNF220Q5VTB9 RNU6-212P-201ENST00000362642 104 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 Y_RNA.259-201ENST00000364619 101 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 RNU6-142P-201ENST00000384019 107 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 Y_RNA.473-201ENST00000384333 102 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 MIR186-201ENST00000384988 86 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 SNORA26.7-201ENST00000391288 122 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 AL078595.1-201ENST00000404458 226 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 RNU6-1328P-201ENST00000410938 106 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.12□□□□□ -1.91
RNF220Q5VTB9 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.12□□□□□ -1.91
RNF220Q5VTB9 BX276092.3-201ENST00000424182 230 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 AC244670.1-201ENST00000436879 112 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.12□□□□□ -1.91
RNF220Q5VTB9 AL133547.1-201ENST00000448546 220 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 AC115115.1-201ENST00000449927 248 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 snoU13.14-201ENST00000459372 104 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 SNORD19B-201ENST00000459623 84 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RNF220Q5VTB9 AC106707.2-201ENST00000484182 374 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 AC096576.1-201ENST00000489014 359 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 AC104564.1-201ENST00000493028 407 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 AC016632.1-201ENST00000503994 196 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 FCF1P8-201ENST00000510322 597 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.12□□□□□ -1.91
RNF220Q5VTB9 SNORA25.11-201ENST00000515935 105 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 COX6CP5-201ENST00000527162 228 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.12□□□□□ -1.91
RNF220Q5VTB9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.12□□□□□ -1.91
RNF220Q5VTB9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.12□□□□□ -1.91
RNF220Q5VTB9 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.12□□□□□ -1.91
RNF220Q5VTB9 AC007375.1-201ENST00000554513 578 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.12□□□□□ -1.91
RNF220Q5VTB9 AL669831.3-213ENST00000636676 183 ntBASIC3.12□□□□□ -1.91
RNF220Q5VTB9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNF220Q5VTB9 AP000560.1-201ENST00000624150 1937 ntBASIC3.11□□□□□ -1.91
RNF220Q5VTB9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RNF220Q5VTB9 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNF220Q5VTB9 U3.13-201ENST00000364804 214 ntBASIC3.11□□□□□ -1.91
RNF220Q5VTB9 MIR181B1-201ENST00000385240 110 ntBASIC3.11□□□□□ -1.91
RNF220Q5VTB9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RNF220Q5VTB9 SNORD17-201ENST00000390930 237 ntBASIC3.11□□□□□ -1.91
RNF220Q5VTB9 RN7SKP202-201ENST00000410439 330 ntBASIC3.11□□□□□ -1.91
RNF220Q5VTB9 RNU6-1304P-201ENST00000411374 106 ntBASIC3.11□□□□□ -1.91
RNF220Q5VTB9 AL513477.1-202ENST00000417061 214 ntBASIC3.11□□□□□ -1.91
RNF220Q5VTB9 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF220Q5VTB9 Y_RNA.653-201ENST00000459091 95 ntBASIC3.11□□□□□ -1.91
RNF220Q5VTB9 RPL7P42-201ENST00000481005 679 ntBASIC3.11□□□□□ -1.91
RNF220Q5VTB9 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF220Q5VTB9 AC091874.1-201ENST00000511402 339 ntBASIC3.11□□□□□ -1.91
RNF220Q5VTB9 SCARNA3-201ENST00000517097 143 ntBASIC3.11□□□□□ -1.91
RNF220Q5VTB9 Y_RNA.718-201ENST00000517110 102 ntBASIC3.11□□□□□ -1.91
RNF220Q5VTB9 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.11□□□□□ -1.91
RNF220Q5VTB9 AC004832.5-201ENST00000608677 401 ntBASIC3.11□□□□□ -1.91
RNF220Q5VTB9 AC126177.8-201ENST00000618339 1015 ntBASIC3.11□□□□□ -1.91
RNF220Q5VTB9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.11□□□□□ -1.91
RNF220Q5VTB9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNF220Q5VTB9 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.11□□□□□ -1.91
RNF220Q5VTB9 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
RNF220Q5VTB9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNF220Q5VTB9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
RNF220Q5VTB9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RNF220Q5VTB9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms