Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC38Q502W7 AC023141.11-201ENST00000508864 202 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 AC008885.1-201ENST00000514930 301 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 SNORA25.11-201ENST00000515935 105 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 RNU6-256P-201ENST00000516747 97 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 RN7SKP256-201ENST00000517201 314 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC38Q502W7 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC38Q502W7 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC38Q502W7 MIR5004-201ENST00000579078 107 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 AC009314.1-201ENST00000603871 304 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 ELOCP5-201ENST00000604924 333 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 AC005000.2-201ENST00000605468 310 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 AC064836.2-201ENST00000609491 462 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 AC007792.1-201ENST00000623023 402 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 AC009033.1-201ENST00000624279 431 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC38Q502W7 CASC19-280ENST00000642102 1351 ntBASIC3.02□□□□□ -1.93
CCDC38Q502W7 Y_RNA.72-201ENST00000362894 103 ntBASIC3.02□□□□□ -1.93
CCDC38Q502W7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC38Q502W7 RNU1-57P-201ENST00000384491 166 ntBASIC3.02□□□□□ -1.93
CCDC38Q502W7 RNU2-23P-201ENST00000410545 195 ntBASIC3.02□□□□□ -1.93
CCDC38Q502W7 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC38Q502W7 AL445687.1-201ENST00000439946 251 ntBASIC3.02□□□□□ -1.93
CCDC38Q502W7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC38Q502W7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC38Q502W7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.02□□□□□ -1.93
CCDC38Q502W7 RPS29P2-201ENST00000479278 136 ntBASIC3.02□□□□□ -1.93
CCDC38Q502W7 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC38Q502W7 AC092436.3-201ENST00000511788 257 ntBASIC3.02□□□□□ -1.93
CCDC38Q502W7 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC38Q502W7 RN7SKP40-201ENST00000517211 242 ntBASIC3.02□□□□□ -1.93
CCDC38Q502W7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC38Q502W7 AC026371.1-201ENST00000551867 419 ntBASIC3.02□□□□□ -1.93
CCDC38Q502W7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC38Q502W7 AC073410.2-201ENST00000603240 332 ntBASIC3.02□□□□□ -1.93
CCDC38Q502W7 AC069294.1-201ENST00000608397 350 ntBASIC3.02□□□□□ -1.93
CCDC38Q502W7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CCDC38Q502W7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CCDC38Q502W7 RNA5SP374-201ENST00000362939 125 ntBASIC3.01□□□□□ -1.93
CCDC38Q502W7 SNORA32.2-201ENST00000384049 122 ntBASIC3.01□□□□□ -1.93
CCDC38Q502W7 RNU6-1013P-201ENST00000384180 107 ntBASIC3.01□□□□□ -1.93
CCDC38Q502W7 MIR544A-201ENST00000384855 91 ntBASIC3.01□□□□□ -1.93
CCDC38Q502W7 RNU2-25P-201ENST00000411041 191 ntBASIC3.01□□□□□ -1.93
CCDC38Q502W7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.01□□□□□ -1.93
CCDC38Q502W7 EIF4EP4-201ENST00000424916 578 ntBASIC3.01□□□□□ -1.93
CCDC38Q502W7 RPL7P12-201ENST00000446719 750 ntBASIC3.01□□□□□ -1.93
CCDC38Q502W7 AP000705.1-201ENST00000454567 350 ntBASIC3.01□□□□□ -1.93
CCDC38Q502W7 AC117440.1-201ENST00000474107 571 ntBASIC3.01□□□□□ -1.93
CCDC38Q502W7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.01□□□□□ -1.93
CCDC38Q502W7 PRDX4P1-201ENST00000507189 574 ntBASIC3.01□□□□□ -1.93
CCDC38Q502W7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC38Q502W7 AC010486.1-201ENST00000511793 424 ntBASIC3.01□□□□□ -1.93
CCDC38Q502W7 SMURF2P1-201ENST00000514992 481 ntBASIC3.01□□□□□ -1.93
CCDC38Q502W7 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.01□□□□□ -1.93
CCDC38Q502W7 RNU6-864P-201ENST00000516256 108 ntBASIC3.01□□□□□ -1.93
CCDC38Q502W7 RN7SKP272-201ENST00000516988 232 ntBASIC3.01□□□□□ -1.93
CCDC38Q502W7 AC009812.2-201ENST00000517657 457 ntBASIC3.01□□□□□ -1.93
CCDC38Q502W7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC38Q502W7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC38Q502W7 AC104576.1-201ENST00000524225 88 ntBASIC3.01□□□□□ -1.93
CCDC38Q502W7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC38Q502W7 AC105245.1-201ENST00000581934 244 ntBASIC3.01□□□□□ -1.93
CCDC38Q502W7 AL138726.1-201ENST00000614873 333 ntBASIC3.01□□□□□ -1.93
CCDC38Q502W7 uc_338.15-201ENST00000615470 191 ntBASIC3.01□□□□□ -1.93
CCDC38Q502W7 AC241585.2-209ENST00000638217 143 ntBASIC3.01□□□□□ -1.93
CCDC38Q502W7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC38Q502W7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CCDC38Q502W7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CCDC38Q502W7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC38Q502W7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3□□□□□ -1.93
CCDC38Q502W7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
CCDC38Q502W7 RNU1-140P-201ENST00000365040 165 ntBASIC3□□□□□ -1.93
CCDC38Q502W7 RNU6-1283P-201ENST00000365314 105 ntBASIC3□□□□□ -1.93
CCDC38Q502W7 RNU1-109P-201ENST00000383960 147 ntBASIC3□□□□□ -1.93
CCDC38Q502W7 RNU6-831P-201ENST00000384548 107 ntBASIC3□□□□□ -1.93
CCDC38Q502W7 RNU6-1222P-201ENST00000384615 107 ntBASIC3□□□□□ -1.93
CCDC38Q502W7 MIR128-1-201ENST00000384921 82 ntBASIC3□□□□□ -1.93
CCDC38Q502W7 RNU6-510P-201ENST00000391239 108 ntBASIC3□□□□□ -1.93
CCDC38Q502W7 NDUFB4P4-201ENST00000404822 243 ntBASIC3□□□□□ -1.93
CCDC38Q502W7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3□□□□□ -1.93
CCDC38Q502W7 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3□□□□□ -1.93
CCDC38Q502W7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3□□□□□ -1.93
CCDC38Q502W7 RPL39P29-201ENST00000447779 157 ntBASIC3□□□□□ -1.93
CCDC38Q502W7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3□□□□□ -1.93
CCDC38Q502W7 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3□□□□□ -1.93
CCDC38Q502W7 RPL30P12-201ENST00000474666 353 ntBASIC3□□□□□ -1.93
CCDC38Q502W7 AP000889.2-201ENST00000532684 490 ntBASIC3□□□□□ -1.93
CCDC38Q502W7 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3□□□□□ -1.93
CCDC38Q502W7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3□□□□□ -1.93
CCDC38Q502W7 AC027176.1-201ENST00000560204 514 ntBASIC3□□□□□ -1.93
CCDC38Q502W7 YPEL5P2-201ENST00000605553 359 ntBASIC3□□□□□ -1.93
CCDC38Q502W7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC38Q502W7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC38Q502W7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC38Q502W7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CCDC38Q502W7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC38Q502W7 RNU6-692P-201ENST00000384496 107 ntBASIC2.99□□□□□ -1.93
CCDC38Q502W7 MIR186-201ENST00000384988 86 ntBASIC2.99□□□□□ -1.93
CCDC38Q502W7 RNU6-220P-201ENST00000390919 107 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms