Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 RNU6-840P-201ENST00000517275 65 ntBASIC0.33□□□□□ -2.36
HMGXB3Q12766 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.33□□□□□ -2.36
HMGXB3Q12766 AC008088.1-201ENST00000580993 280 ntBASIC0.33□□□□□ -2.36
HMGXB3Q12766 AC242628.1-201ENST00000606810 391 ntBASIC0.33□□□□□ -2.36
HMGXB3Q12766 MTCO1P18-201ENST00000455518 1419 ntBASIC0.33□□□□□ -2.36
HMGXB3Q12766 RNU6-546P-201ENST00000383991 107 ntBASIC0.33□□□□□ -2.36
HMGXB3Q12766 AL161935.2-201ENST00000414627 60 ntBASIC0.33□□□□□ -2.36
HMGXB3Q12766 UBE2V1P8-201ENST00000437166 265 ntBASIC0.33□□□□□ -2.36
HMGXB3Q12766 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.33□□□□□ -2.36
HMGXB3Q12766 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.33□□□□□ -2.36
HMGXB3Q12766 CYCTP-201ENST00000504253 315 ntBASIC0.33□□□□□ -2.36
HMGXB3Q12766 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.33□□□□□ -2.36
HMGXB3Q12766 RNU6-197P-201ENST00000516680 100 ntBASIC0.33□□□□□ -2.36
HMGXB3Q12766 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.33□□□□□ -2.36
HMGXB3Q12766 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.33□□□□□ -2.36
HMGXB3Q12766 AL583856.2-201ENST00000606298 543 ntBASIC0.33□□□□□ -2.36
HMGXB3Q12766 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
HMGXB3Q12766 Y_RNA.255-201ENST00000364581 97 ntBASIC0.32□□□□□ -2.36
HMGXB3Q12766 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.32□□□□□ -2.36
HMGXB3Q12766 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.32□□□□□ -2.36
HMGXB3Q12766 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.32□□□□□ -2.36
HMGXB3Q12766 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.32□□□□□ -2.36
HMGXB3Q12766 BPTFP1-201ENST00000579209 492 ntBASIC0.32□□□□□ -2.36
HMGXB3Q12766 RPL30P11-203ENST00000598995 310 ntBASIC0.32□□□□□ -2.36
HMGXB3Q12766 Z82243.1-201ENST00000609432 473 ntBASIC0.32□□□□□ -2.36
HMGXB3Q12766 AL132822.1-201ENST00000617063 513 ntBASIC0.32□□□□□ -2.36
HMGXB3Q12766 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
HMGXB3Q12766 Y_RNA.245-201ENST00000364493 95 ntBASIC0.31□□□□□ -2.36
HMGXB3Q12766 SNORD114-24-201ENST00000365029 72 ntBASIC0.31□□□□□ -2.36
HMGXB3Q12766 AC007435.1-201ENST00000421086 415 ntBASIC0.31□□□□□ -2.36
HMGXB3Q12766 ELOCP14-201ENST00000428070 331 ntBASIC0.31□□□□□ -2.36
HMGXB3Q12766 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
HMGXB3Q12766 ELOCP7-201ENST00000439968 331 ntBASIC0.31□□□□□ -2.36
HMGXB3Q12766 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.31□□□□□ -2.36
HMGXB3Q12766 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.31□□□□□ -2.36
HMGXB3Q12766 RNU6-581P-201ENST00000516214 105 ntBASIC0.31□□□□□ -2.36
HMGXB3Q12766 RN7SKP88-201ENST00000516847 250 ntBASIC0.31□□□□□ -2.36
HMGXB3Q12766 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.31□□□□□ -2.36
HMGXB3Q12766 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.31□□□□□ -2.36
HMGXB3Q12766 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.31□□□□□ -2.36
HMGXB3Q12766 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.31□□□□□ -2.36
HMGXB3Q12766 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.31□□□□□ -2.36
HMGXB3Q12766 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.31□□□□□ -2.36
HMGXB3Q12766 AL020997.3-201ENST00000602843 359 ntBASIC0.31□□□□□ -2.36
HMGXB3Q12766 RNU6-91P-201ENST00000607774 107 ntBASIC0.31□□□□□ -2.36
HMGXB3Q12766 7SK.8-201ENST00000612110 250 ntBASIC0.31□□□□□ -2.36
HMGXB3Q12766 7SK.11-201ENST00000615477 250 ntBASIC0.31□□□□□ -2.36
HMGXB3Q12766 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.31□□□□□ -2.36
HMGXB3Q12766 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.31□□□□□ -2.36
HMGXB3Q12766 7SK.13-201ENST00000622040 250 ntBASIC0.31□□□□□ -2.36
HMGXB3Q12766 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
HMGXB3Q12766 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.3□□□□□ -2.36
HMGXB3Q12766 AC013267.1-201ENST00000458227 267 ntBASIC0.3□□□□□ -2.36
HMGXB3Q12766 MTND1P16-201ENST00000465177 898 ntBASIC0.3□□□□□ -2.36
HMGXB3Q12766 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.3□□□□□ -2.36
HMGXB3Q12766 RNU4-54P-201ENST00000516428 129 ntBASIC0.3□□□□□ -2.36
HMGXB3Q12766 RNU6-678P-201ENST00000516832 109 ntBASIC0.3□□□□□ -2.36
HMGXB3Q12766 AC090142.3-201ENST00000519012 385 ntBASIC0.3□□□□□ -2.36
HMGXB3Q12766 AL512310.8-201ENST00000550183 120 ntBASIC0.3□□□□□ -2.36
HMGXB3Q12766 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.3□□□□□ -2.36
HMGXB3Q12766 AL355598.1-201ENST00000604169 202 ntBASIC0.3□□□□□ -2.36
HMGXB3Q12766 AL603758.1-201ENST00000618654 241 ntBASIC0.3□□□□□ -2.36
HMGXB3Q12766 AC138627.2-201ENST00000624202 601 ntBASIC0.3□□□□□ -2.36
HMGXB3Q12766 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.3□□□□□ -2.36
HMGXB3Q12766 AL590396.4-201ENST00000636779 956 ntBASIC0.3□□□□□ -2.36
HMGXB3Q12766 MIR19B1-201ENST00000384829 87 ntBASIC0.29□□□□□ -2.36
HMGXB3Q12766 SNX2P2-201ENST00000424553 323 ntBASIC0.29□□□□□ -2.36
HMGXB3Q12766 AL358794.1-201ENST00000445689 381 ntBASIC0.29□□□□□ -2.36
HMGXB3Q12766 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.29□□□□□ -2.36
HMGXB3Q12766 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.29□□□□□ -2.36
HMGXB3Q12766 RNU5B-3P-201ENST00000516601 115 ntBASIC0.29□□□□□ -2.36
HMGXB3Q12766 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.29□□□□□ -2.36
HMGXB3Q12766 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.29□□□□□ -2.36
HMGXB3Q12766 MTCO2P15-201ENST00000532655 656 ntBASIC0.29□□□□□ -2.36
HMGXB3Q12766 MRPS36P5-201ENST00000551909 298 ntBASIC0.29□□□□□ -2.36
HMGXB3Q12766 AL355802.4-201ENST00000607635 548 ntBASIC0.29□□□□□ -2.36
HMGXB3Q12766 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.29□□□□□ -2.36
HMGXB3Q12766 AC092447.10-201ENST00000620607 1652 ntBASIC0.29□□□□□ -2.36
HMGXB3Q12766 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.28□□□□□ -2.36
HMGXB3Q12766 OR2AQ1P-201ENST00000451972 200 ntBASIC0.28□□□□□ -2.36
HMGXB3Q12766 BET1P1-201ENST00000482276 359 ntBASIC0.28□□□□□ -2.36
HMGXB3Q12766 AC011005.2-201ENST00000487324 359 ntBASIC0.28□□□□□ -2.36
HMGXB3Q12766 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.28□□□□□ -2.36
HMGXB3Q12766 AC005951.2-201ENST00000576282 495 ntBASIC0.28□□□□□ -2.36
HMGXB3Q12766 ZNF849P-201ENST00000594711 1566 ntBASIC0.28□□□□□ -2.37
HMGXB3Q12766 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.28□□□□□ -2.37
HMGXB3Q12766 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.28□□□□□ -2.37
HMGXB3Q12766 Y_RNA.99-201ENST00000363138 105 ntBASIC0.28□□□□□ -2.37
HMGXB3Q12766 RNU6-23P-201ENST00000363283 107 ntBASIC0.28□□□□□ -2.37
HMGXB3Q12766 RNU5E-8P-201ENST00000363502 116 ntBASIC0.28□□□□□ -2.37
HMGXB3Q12766 SNORD18A-201ENST00000363753 72 ntBASIC0.28□□□□□ -2.37
HMGXB3Q12766 RNU6-658P-201ENST00000384606 106 ntBASIC0.28□□□□□ -2.37
HMGXB3Q12766 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.28□□□□□ -2.37
HMGXB3Q12766 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.28□□□□□ -2.37
HMGXB3Q12766 RPS26P5-201ENST00000418544 335 ntBASIC0.28□□□□□ -2.37
HMGXB3Q12766 AL451054.2-201ENST00000420896 202 ntBASIC0.28□□□□□ -2.37
HMGXB3Q12766 AC019178.2-201ENST00000423595 505 ntBASIC0.28□□□□□ -2.37
HMGXB3Q12766 CECR9-201ENST00000453421 199 ntBASIC0.28□□□□□ -2.37
HMGXB3Q12766 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.28□□□□□ -2.37
HMGXB3Q12766 PDCD5P2-201ENST00000507570 312 ntBASIC0.28□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms