Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.86□□□□□ -1.95
LTBQ06643 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.86□□□□□ -1.95
LTBQ06643 PCMTD1P1-201ENST00000455560 355 ntBASIC2.86□□□□□ -1.95
LTBQ06643 AC146507.2-201ENST00000460608 476 ntBASIC2.86□□□□□ -1.95
LTBQ06643 AC006445.1-201ENST00000491925 405 ntBASIC2.86□□□□□ -1.95
LTBQ06643 HMGB1P30-201ENST00000492455 606 ntBASIC2.86□□□□□ -1.95
LTBQ06643 AC139453.3-201ENST00000493276 369 ntBASIC2.86□□□□□ -1.95
LTBQ06643 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.86□□□□□ -1.95
LTBQ06643 AC113155.1-201ENST00000511141 769 ntBASIC2.86□□□□□ -1.95
LTBQ06643 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.86□□□□□ -1.95
LTBQ06643 HMGB1P14-201ENST00000557424 591 ntBASIC2.86□□□□□ -1.95
LTBQ06643 MIR4474-201ENST00000579189 78 ntBASIC2.86□□□□□ -1.95
LTBQ06643 AC104695.3-201ENST00000604052 296 ntBASIC2.86□□□□□ -1.95
LTBQ06643 AL591516.1-201ENST00000611326 274 ntBASIC2.86□□□□□ -1.95
LTBQ06643 AC010205.1-201ENST00000616668 449 ntBASIC2.86□□□□□ -1.95
LTBQ06643 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.86□□□□□ -1.95
LTBQ06643 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.86□□□□□ -1.95
LTBQ06643 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.86□□□□□ -1.95
LTBQ06643 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.86□□□□□ -1.95
LTBQ06643 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LTBQ06643 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.85□□□□□ -1.95
LTBQ06643 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
LTBQ06643 RNU6-37P-201ENST00000362692 107 ntBASIC2.85□□□□□ -1.95
LTBQ06643 Y_RNA.48-201ENST00000362710 103 ntBASIC2.85□□□□□ -1.95
LTBQ06643 Y_RNA.80-201ENST00000362996 102 ntBASIC2.85□□□□□ -1.95
LTBQ06643 RNU6-11P-201ENST00000364234 107 ntBASIC2.85□□□□□ -1.95
LTBQ06643 Y_RNA.245-201ENST00000364493 95 ntBASIC2.85□□□□□ -1.95
LTBQ06643 RNU6-25P-201ENST00000383873 107 ntBASIC2.85□□□□□ -1.95
LTBQ06643 RNU6-1-201ENST00000383898 107 ntBASIC2.85□□□□□ -1.95
LTBQ06643 RNU6-48P-201ENST00000384161 107 ntBASIC2.85□□□□□ -1.95
LTBQ06643 RNU6-36P-201ENST00000384172 107 ntBASIC2.85□□□□□ -1.95
LTBQ06643 RNU6-4P-201ENST00000384205 107 ntBASIC2.85□□□□□ -1.95
LTBQ06643 RNU6-5P-201ENST00000384238 107 ntBASIC2.85□□□□□ -1.95
LTBQ06643 RNU6-3P-201ENST00000384314 107 ntBASIC2.85□□□□□ -1.95
LTBQ06643 RNU6-196P-201ENST00000384315 107 ntBASIC2.85□□□□□ -1.95
LTBQ06643 RNU6-16P-201ENST00000384385 107 ntBASIC2.85□□□□□ -1.95
LTBQ06643 Y_RNA.485-201ENST00000384395 102 ntBASIC2.85□□□□□ -1.95
LTBQ06643 RNU6-15P-201ENST00000384534 107 ntBASIC2.85□□□□□ -1.95
LTBQ06643 RNU6-2-201ENST00000384627 107 ntBASIC2.85□□□□□ -1.95
LTBQ06643 RNU6-29P-201ENST00000384637 107 ntBASIC2.85□□□□□ -1.95
LTBQ06643 SNORA41-201ENST00000384675 132 ntBASIC2.85□□□□□ -1.95
LTBQ06643 Y_RNA.557-201ENST00000384680 107 ntBASIC2.85□□□□□ -1.95
LTBQ06643 RNU6-9-201ENST00000384776 107 ntBASIC2.85□□□□□ -1.95
LTBQ06643 RNU6-33P-201ENST00000384793 107 ntBASIC2.85□□□□□ -1.95
LTBQ06643 AL591034.1-201ENST00000407447 340 ntBASIC2.85□□□□□ -1.95
LTBQ06643 RNU6-325P-201ENST00000411132 105 ntBASIC2.85□□□□□ -1.95
LTBQ06643 YPEL5P1-201ENST00000419731 367 ntBASIC2.85□□□□□ -1.95
LTBQ06643 PGBD4P6-201ENST00000421501 610 ntBASIC2.85□□□□□ -1.95
LTBQ06643 MRPS18CP6-201ENST00000423587 223 ntBASIC2.85□□□□□ -1.95
LTBQ06643 BX276092.3-201ENST00000424182 230 ntBASIC2.85□□□□□ -1.95
LTBQ06643 AL133396.1-201ENST00000432048 687 ntBASIC2.85□□□□□ -1.95
LTBQ06643 AL353705.1-201ENST00000433468 480 ntBASIC2.85□□□□□ -1.95
LTBQ06643 SNRPEP4-201ENST00000435815 279 ntBASIC2.85□□□□□ -1.95
LTBQ06643 HMGN2P20-201ENST00000437531 273 ntBASIC2.85□□□□□ -1.95
LTBQ06643 RPS12P18-201ENST00000442381 270 ntBASIC2.85□□□□□ -1.95
LTBQ06643 SSXP4-201ENST00000451349 245 ntBASIC2.85□□□□□ -1.95
LTBQ06643 BTF3P15-201ENST00000455606 336 ntBASIC2.85□□□□□ -1.95
LTBQ06643 AC008571.1-201ENST00000467232 300 ntBASIC2.85□□□□□ -1.95
LTBQ06643 RN7SL330P-201ENST00000469709 307 ntBASIC2.85□□□□□ -1.95
LTBQ06643 AL160314.1-201ENST00000490836 438 ntBASIC2.85□□□□□ -1.95
LTBQ06643 RNU6-764P-201ENST00000516396 105 ntBASIC2.85□□□□□ -1.95
LTBQ06643 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.85□□□□□ -1.95
LTBQ06643 TRAV32-201ENST00000553993 340 ntBASIC2.85□□□□□ -1.95
LTBQ06643 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.85□□□□□ -1.95
LTBQ06643 AC008269.2-201ENST00000561915 1105 ntBASIC2.85□□□□□ -1.95
LTBQ06643 AC109446.1-201ENST00000566172 220 ntBASIC2.85□□□□□ -1.95
LTBQ06643 MIR4435-1-201ENST00000582552 80 ntBASIC2.85□□□□□ -1.95
LTBQ06643 AL121917.1-203ENST00000605534 577 ntBASIC2.85□□□□□ -1.95
LTBQ06643 RNU6-6P-201ENST00000606623 107 ntBASIC2.85□□□□□ -1.95
LTBQ06643 AP002826.1-201ENST00000608835 315 ntBASIC2.85□□□□□ -1.95
LTBQ06643 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
LTBQ06643 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LTBQ06643 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
LTBQ06643 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LTBQ06643 SNORD14B-201ENST00000364533 90 ntBASIC2.84□□□□□ -1.95
LTBQ06643 Y_RNA.428-201ENST00000384078 102 ntBASIC2.84□□□□□ -1.95
LTBQ06643 RNU4-47P-201ENST00000410876 114 ntBASIC2.84□□□□□ -1.95
LTBQ06643 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LTBQ06643 MTCYBP10-201ENST00000424905 650 ntBASIC2.84□□□□□ -1.95
LTBQ06643 AL121890.1-201ENST00000435457 205 ntBASIC2.84□□□□□ -1.95
LTBQ06643 PIGFP3-201ENST00000441918 722 ntBASIC2.84□□□□□ -1.95
LTBQ06643 AL583843.1-201ENST00000456070 346 ntBASIC2.84□□□□□ -1.95
LTBQ06643 AC068781.1-201ENST00000488231 618 ntBASIC2.84□□□□□ -1.95
LTBQ06643 RN7SL283P-201ENST00000489055 303 ntBASIC2.84□□□□□ -1.95
LTBQ06643 YWHAEP4-201ENST00000505390 198 ntBASIC2.84□□□□□ -1.95
LTBQ06643 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.84□□□□□ -1.95
LTBQ06643 RNA5SP290-201ENST00000517133 127 ntBASIC2.84□□□□□ -1.95
LTBQ06643 SNORD116.3-201ENST00000517176 78 ntBASIC2.84□□□□□ -1.95
LTBQ06643 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LTBQ06643 AC025755.1-201ENST00000521306 278 ntBASIC2.84□□□□□ -1.95
LTBQ06643 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.84□□□□□ -1.95
LTBQ06643 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.84□□□□□ -1.95
LTBQ06643 AC092447.9-201ENST00000603395 144 ntBASIC2.84□□□□□ -1.95
LTBQ06643 AC087588.2-201ENST00000617667 426 ntBASIC2.84□□□□□ -1.95
LTBQ06643 IGHVIII-44-202ENST00000636235 289 ntBASIC2.84□□□□□ -1.95
LTBQ06643 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
LTBQ06643 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LTBQ06643 AC007256.1-201ENST00000392253 2765 ntBASIC2.84□□□□□ -1.95
LTBQ06643 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LTBQ06643 AC091812.1-201ENST00000432235 1948 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms