Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AL590396.2-201ENST00000636511 1041 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
PRKDCP78527 SNORA51.10-201ENST00000384418 136 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
PRKDCP78527 SNORD89-201ENST00000390981 114 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 DHFRP6-201ENST00000401776 268 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 SNX3P1X-201ENST00000414887 175 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
PRKDCP78527 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.04□□□□□ -2.4
PRKDCP78527 OR2AQ1P-201ENST00000451972 200 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 OR6C5P-201ENST00000452388 923 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.04□□□□□ -2.4
PRKDCP78527 RNA5SP168-201ENST00000516642 112 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.04□□□□□ -2.4
PRKDCP78527 EIF1P4-201ENST00000572664 335 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 HMGB1P51-201ENST00000605166 638 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 AL121652.1-201ENST00000608851 448 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.04□□□□□ -2.4
PRKDCP78527 MIR506-201ENST00000384998 124 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
PRKDCP78527 FAM204CP-201ENST00000424489 642 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 AL392003.1-201ENST00000434394 243 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.04□□□□□ -2.4
PRKDCP78527 BET1P1-201ENST00000482276 359 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 AL160314.1-201ENST00000490836 438 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.04□□□□□ -2.4
PRKDCP78527 MTATP6P9-201ENST00000515039 680 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 RNA5SP134-201ENST00000516492 96 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 RN7SKP258-201ENST00000517151 304 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 RSL24D1P11-201ENST00000591045 491 ntBASIC0.04□□□□□ -2.4
PRKDCP78527 MTND4P14-201ENST00000435799 1354 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 RNU6-945P-201ENST00000383947 107 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 RNU6-1126P-201ENST00000384002 107 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 RPS27P16-201ENST00000425758 201 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 SMURF2P1-201ENST00000514992 481 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.03□□□□□ -2.4
PRKDCP78527 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.03□□□□□ -2.4
PRKDCP78527 AL136520.1-202ENST00000555494 763 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 AC012213.3-201ENST00000577199 777 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 MIR5093-201ENST00000583199 100 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 AC009318.4-201ENST00000620496 486 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 AC093648.1-201ENST00000623546 606 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 AC027335.2-201ENST00000624030 375 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 AL512506.2-201ENST00000624472 458 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.03□□□□□ -2.4
PRKDCP78527 HSPE1P9-201ENST00000440046 311 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.03□□□□□ -2.4
PRKDCP78527 RAP1BP2-201ENST00000478270 544 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 RPL30P1-201ENST00000488676 339 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.03□□□□□ -2.4
PRKDCP78527 RNU6-567P-201ENST00000516746 107 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.03□□□□□ -2.4
PRKDCP78527 Z98751.3-201ENST00000604447 521 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 AC069304.2-201ENST00000605154 435 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 AC006213.4-201ENST00000616184 634 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 AC100810.6-201ENST00000638068 285 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 RNU6-1327P-201ENST00000365302 105 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 Y_RNA.583-201ENST00000391033 113 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC0.03□□□□□ -2.4
PRKDCP78527 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.03□□□□□ -2.4
PRKDCP78527 SNORD116-28-201ENST00000516123 91 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 SCARNA16.5-201ENST00000517114 183 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 RNU6-840P-201ENST00000517275 65 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.03□□□□□ -2.4
PRKDCP78527 AC004067.1-201ENST00000608733 700 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 MIR8063-201ENST00000621930 81 ntBASIC0.03□□□□□ -2.4
PRKDCP78527 RNU6-654P-201ENST00000364373 107 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 RNU6-921P-201ENST00000384361 107 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 Y_RNA.551-201ENST00000384661 102 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 RNU6-1237P-201ENST00000384777 107 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 MIR525-201ENST00000384978 85 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 HMGN2P22-201ENST00000427588 175 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 AC099677.2-201ENST00000436385 175 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.02□□□□□ -2.41
PRKDCP78527 AC016717.1-201ENST00000448918 286 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 RNA5SP269-201ENST00000459032 137 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.02□□□□□ -2.41
PRKDCP78527 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.02□□□□□ -2.41
PRKDCP78527 AC012669.1-201ENST00000603209 283 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 AC098614.4-201ENST00000607601 462 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 AC100812.1-201ENST00000607622 580 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 AC135803.1-201ENST00000608748 565 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 AC073349.3-201ENST00000617616 186 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 SNORD115-41-201ENST00000363608 82 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 SNORA4.1-201ENST00000364263 144 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 Y_RNA.245-201ENST00000364493 95 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 Y_RNA.447-201ENST00000384184 113 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
PRKDCP78527 AC092423.1-201ENST00000430165 186 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 AC233266.1-201ENST00000454518 96 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.02□□□□□ -2.41
PRKDCP78527 RN7SKP12-201ENST00000516275 143 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 HIGD1AP6-201ENST00000521833 279 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.02□□□□□ -2.41
PRKDCP78527 AC069114.2-201ENST00000604699 304 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 AC105129.3-201ENST00000605455 485 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 AC021851.1-201ENST00000608537 1082 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 AC242852.1-201ENST00000612151 96 ntBASIC0.02□□□□□ -2.41
PRKDCP78527 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms