Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AL161788.1-201ENST00000441805 169 ntBASIC1.86□□□□□ -2.11
IRX3P78415 RPL7P43-201ENST00000478876 753 ntBASIC1.86□□□□□ -2.11
IRX3P78415 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.86□□□□□ -2.11
IRX3P78415 RNU6-232P-201ENST00000517144 64 ntBASIC1.86□□□□□ -2.11
IRX3P78415 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.86□□□□□ -2.11
IRX3P78415 AP003072.2-201ENST00000527756 676 ntBASIC1.86□□□□□ -2.11
IRX3P78415 AC008015.1-201ENST00000555505 465 ntBASIC1.86□□□□□ -2.11
IRX3P78415 AC092325.1-201ENST00000566449 554 ntBASIC1.86□□□□□ -2.11
IRX3P78415 AC012435.1-202ENST00000568772 240 ntBASIC1.86□□□□□ -2.11
IRX3P78415 MIR4713-201ENST00000582691 75 ntBASIC1.86□□□□□ -2.11
IRX3P78415 MIR4760-201ENST00000585040 80 ntBASIC1.86□□□□□ -2.11
IRX3P78415 MIR548AC-201ENST00000585049 88 ntBASIC1.86□□□□□ -2.11
IRX3P78415 BNIP3P25-201ENST00000596023 559 ntBASIC1.86□□□□□ -2.11
IRX3P78415 AL022161.1-201ENST00000604390 213 ntBASIC1.86□□□□□ -2.11
IRX3P78415 AL138963.2-201ENST00000605137 226 ntBASIC1.86□□□□□ -2.11
IRX3P78415 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.86□□□□□ -2.11
IRX3P78415 AC012409.4-201ENST00000612923 249 ntBASIC1.86□□□□□ -2.11
IRX3P78415 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.86□□□□□ -2.11
IRX3P78415 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.86□□□□□ -2.11
IRX3P78415 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
IRX3P78415 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
IRX3P78415 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
IRX3P78415 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.85□□□□□ -2.11
IRX3P78415 RNU6-529P-201ENST00000363383 104 ntBASIC1.85□□□□□ -2.11
IRX3P78415 RNU4-91P-201ENST00000364778 135 ntBASIC1.85□□□□□ -2.11
IRX3P78415 U3.13-201ENST00000364804 214 ntBASIC1.85□□□□□ -2.11
IRX3P78415 MTCYBP36-201ENST00000404146 440 ntBASIC1.85□□□□□ -2.11
IRX3P78415 RNU6-955P-201ENST00000410497 104 ntBASIC1.85□□□□□ -2.11
IRX3P78415 RN7SKP101-201ENST00000411376 320 ntBASIC1.85□□□□□ -2.11
IRX3P78415 AL160275.3-201ENST00000423876 471 ntBASIC1.85□□□□□ -2.11
IRX3P78415 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.85□□□□□ -2.11
IRX3P78415 AL365400.1-201ENST00000431854 640 ntBASIC1.85□□□□□ -2.11
IRX3P78415 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.85□□□□□ -2.11
IRX3P78415 MTND6P13-201ENST00000443510 523 ntBASIC1.85□□□□□ -2.11
IRX3P78415 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
IRX3P78415 ZNF114P1-201ENST00000453500 292 ntBASIC1.85□□□□□ -2.11
IRX3P78415 HMGB1P30-201ENST00000492455 606 ntBASIC1.85□□□□□ -2.11
IRX3P78415 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.85□□□□□ -2.11
IRX3P78415 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
IRX3P78415 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
IRX3P78415 ZNF321P-202ENST00000550843 495 ntBASIC1.85□□□□□ -2.11
IRX3P78415 MIR5692A1-201ENST00000580523 69 ntBASIC1.85□□□□□ -2.11
IRX3P78415 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.85□□□□□ -2.11
IRX3P78415 AL360219.1-201ENST00000610230 366 ntBASIC1.85□□□□□ -2.11
IRX3P78415 AC091304.6-201ENST00000619761 202 ntBASIC1.85□□□□□ -2.11
IRX3P78415 AC017037.3-201ENST00000625016 472 ntBASIC1.85□□□□□ -2.11
IRX3P78415 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.85□□□□□ -2.11
IRX3P78415 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
IRX3P78415 MTND5P17-201ENST00000418405 1603 ntBASIC1.84□□□□□ -2.11
IRX3P78415 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.84□□□□□ -2.11
IRX3P78415 RNU5E-1-201ENST00000362477 120 ntBASIC1.84□□□□□ -2.11
IRX3P78415 RAP1BP3-201ENST00000407180 549 ntBASIC1.84□□□□□ -2.11
IRX3P78415 RNA5SP390-201ENST00000410191 113 ntBASIC1.84□□□□□ -2.11
IRX3P78415 MTCYBP5-201ENST00000423752 1135 ntBASIC1.84□□□□□ -2.11
IRX3P78415 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.84□□□□□ -2.11
IRX3P78415 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.84□□□□□ -2.11
IRX3P78415 MED28P2-201ENST00000475771 317 ntBASIC1.84□□□□□ -2.11
IRX3P78415 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.84□□□□□ -2.11
IRX3P78415 SNORA48.11-201ENST00000517015 89 ntBASIC1.84□□□□□ -2.11
IRX3P78415 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.84□□□□□ -2.11
IRX3P78415 AP003181.2-201ENST00000528941 181 ntBASIC1.84□□□□□ -2.11
IRX3P78415 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.84□□□□□ -2.11
IRX3P78415 OR5B19P-201ENST00000531766 928 ntBASIC1.84□□□□□ -2.11
IRX3P78415 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.84□□□□□ -2.11
IRX3P78415 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.84□□□□□ -2.11
IRX3P78415 AC136619.2-201ENST00000563361 631 ntBASIC1.84□□□□□ -2.11
IRX3P78415 AC015720.1-201ENST00000565251 277 ntBASIC1.84□□□□□ -2.11
IRX3P78415 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.84□□□□□ -2.11
IRX3P78415 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.84□□□□□ -2.11
IRX3P78415 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.84□□□□□ -2.11
IRX3P78415 AC099654.13-201ENST00000639774 207 ntBASIC1.84□□□□□ -2.11
IRX3P78415 AL161722.3-201ENST00000605789 2983 ntBASIC1.84□□□□□ -2.12
IRX3P78415 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
IRX3P78415 OR4G2P-201ENST00000328113 903 ntBASIC1.83□□□□□ -2.12
IRX3P78415 RNU6-553P-201ENST00000364047 96 ntBASIC1.83□□□□□ -2.12
IRX3P78415 Y_RNA.269-201ENST00000364685 89 ntBASIC1.83□□□□□ -2.12
IRX3P78415 Y_RNA.327-201ENST00000365201 102 ntBASIC1.83□□□□□ -2.12
IRX3P78415 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.83□□□□□ -2.12
IRX3P78415 AC092809.3-201ENST00000415453 231 ntBASIC1.83□□□□□ -2.12
IRX3P78415 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.83□□□□□ -2.12
IRX3P78415 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.83□□□□□ -2.12
IRX3P78415 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.83□□□□□ -2.12
IRX3P78415 AC079781.2-201ENST00000446424 169 ntBASIC1.83□□□□□ -2.12
IRX3P78415 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.83□□□□□ -2.12
IRX3P78415 AC079140.5-201ENST00000507882 310 ntBASIC1.83□□□□□ -2.12
IRX3P78415 Vault.3-201ENST00000516676 95 ntBASIC1.83□□□□□ -2.12
IRX3P78415 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.83□□□□□ -2.12
IRX3P78415 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.83□□□□□ -2.12
IRX3P78415 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.83□□□□□ -2.12
IRX3P78415 HMGN1P30-201ENST00000589286 268 ntBASIC1.83□□□□□ -2.12
IRX3P78415 WISP1-OT1-201ENST00000602893 642 ntBASIC1.83□□□□□ -2.12
IRX3P78415 AC091304.9-201ENST00000612091 226 ntBASIC1.83□□□□□ -2.12
IRX3P78415 AC009233.1-201ENST00000616477 371 ntBASIC1.83□□□□□ -2.12
IRX3P78415 uc_338.11-201ENST00000619132 160 ntBASIC1.83□□□□□ -2.12
IRX3P78415 AL603755.1-201ENST00000619504 163 ntBASIC1.83□□□□□ -2.12
IRX3P78415 MIR7111-201ENST00000619751 72 ntBASIC1.83□□□□□ -2.12
IRX3P78415 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.83□□□□□ -2.12
IRX3P78415 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
IRX3P78415 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
IRX3P78415 RNU6-179P-201ENST00000363350 107 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms