Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.78□□□□□ -1.8
HERVK_113P62684 RNU4-42P-201ENST00000364738 142 ntBASIC3.78□□□□□ -1.8
HERVK_113P62684 RNU1-140P-201ENST00000365040 165 ntBASIC3.78□□□□□ -1.8
HERVK_113P62684 RNU6-658P-201ENST00000384606 106 ntBASIC3.78□□□□□ -1.8
HERVK_113P62684 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.78□□□□□ -1.8
HERVK_113P62684 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.78□□□□□ -1.8
HERVK_113P62684 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.78□□□□□ -1.8
HERVK_113P62684 AC092047.1-201ENST00000424997 240 ntBASIC3.78□□□□□ -1.8
HERVK_113P62684 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.78□□□□□ -1.8
HERVK_113P62684 RPL30P5-201ENST00000494923 336 ntBASIC3.78□□□□□ -1.8
HERVK_113P62684 NDUFB4P9-201ENST00000511646 388 ntBASIC3.78□□□□□ -1.8
HERVK_113P62684 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.78□□□□□ -1.8
HERVK_113P62684 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.78□□□□□ -1.8
HERVK_113P62684 SYF2P1-201ENST00000550658 413 ntBASIC3.78□□□□□ -1.8
HERVK_113P62684 AC004584.2-201ENST00000570407 410 ntBASIC3.78□□□□□ -1.8
HERVK_113P62684 AC006600.1-201ENST00000572529 153 ntBASIC3.78□□□□□ -1.8
HERVK_113P62684 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.78□□□□□ -1.8
HERVK_113P62684 MIR5188-201ENST00000583467 113 ntBASIC3.78□□□□□ -1.8
HERVK_113P62684 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.78□□□□□ -1.8
HERVK_113P62684 PRR13P7-201ENST00000605538 430 ntBASIC3.78□□□□□ -1.8
HERVK_113P62684 AC007792.1-201ENST00000623023 402 ntBASIC3.78□□□□□ -1.8
HERVK_113P62684 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.78□□□□□ -1.8
HERVK_113P62684 ZNF299P-201ENST00000406845 1804 ntBASIC3.78□□□□□ -1.8
HERVK_113P62684 AL513302.2-201ENST00000562313 1842 ntBASIC3.78□□□□□ -1.8
HERVK_113P62684 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.78□□□□□ -1.8
HERVK_113P62684 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.78□□□□□ -1.8
HERVK_113P62684 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HERVK_113P62684 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HERVK_113P62684 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HERVK_113P62684 AL365361.1-201ENST00000566942 3481 ntBASIC3.78□□□□□ -1.81
HERVK_113P62684 AL672296.1-201ENST00000427780 2158 ntBASIC3.78□□□□□ -1.81
HERVK_113P62684 SNORA44-201ENST00000384584 132 ntBASIC3.77□□□□□ -1.81
HERVK_113P62684 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
HERVK_113P62684 U3.42-201ENST00000408746 214 ntBASIC3.77□□□□□ -1.81
HERVK_113P62684 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.77□□□□□ -1.81
HERVK_113P62684 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.77□□□□□ -1.81
HERVK_113P62684 AL731563.1-201ENST00000442202 214 ntBASIC3.77□□□□□ -1.81
HERVK_113P62684 AC006539.3-201ENST00000454258 129 ntBASIC3.77□□□□□ -1.81
HERVK_113P62684 CEACAMP4-201ENST00000457676 421 ntBASIC3.77□□□□□ -1.81
HERVK_113P62684 RPL23AP14-201ENST00000468281 468 ntBASIC3.77□□□□□ -1.81
HERVK_113P62684 RN7SL442P-201ENST00000473804 320 ntBASIC3.77□□□□□ -1.81
HERVK_113P62684 AC010655.3-201ENST00000478818 450 ntBASIC3.77□□□□□ -1.81
HERVK_113P62684 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.77□□□□□ -1.81
HERVK_113P62684 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.77□□□□□ -1.81
HERVK_113P62684 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.77□□□□□ -1.81
HERVK_113P62684 AC131281.1-201ENST00000522984 164 ntBASIC3.77□□□□□ -1.81
HERVK_113P62684 AC022616.4-201ENST00000522985 181 ntBASIC3.77□□□□□ -1.81
HERVK_113P62684 CASP1P1-201ENST00000526345 212 ntBASIC3.77□□□□□ -1.81
HERVK_113P62684 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.77□□□□□ -1.81
HERVK_113P62684 AC022080.3-201ENST00000544433 482 ntBASIC3.77□□□□□ -1.81
HERVK_113P62684 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.77□□□□□ -1.81
HERVK_113P62684 AL033523.1-201ENST00000605153 153 ntBASIC3.77□□□□□ -1.81
HERVK_113P62684 AC090425.1-201ENST00000610007 140 ntBASIC3.77□□□□□ -1.81
HERVK_113P62684 AC012531.5-201ENST00000611375 151 ntBASIC3.77□□□□□ -1.81
HERVK_113P62684 AL138825.1-201ENST00000618587 192 ntBASIC3.77□□□□□ -1.81
HERVK_113P62684 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HERVK_113P62684 AC018692.3-201ENST00000623929 123 ntBASIC3.77□□□□□ -1.81
HERVK_113P62684 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
HERVK_113P62684 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
HERVK_113P62684 AC118273.1-201ENST00000525324 3006 ntBASIC3.77□□□□□ -1.81
HERVK_113P62684 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HERVK_113P62684 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HERVK_113P62684 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HERVK_113P62684 RNU1-70P-201ENST00000362618 164 ntBASIC3.76□□□□□ -1.81
HERVK_113P62684 U3.6-201ENST00000363622 211 ntBASIC3.76□□□□□ -1.81
HERVK_113P62684 Y_RNA.210-201ENST00000364161 110 ntBASIC3.76□□□□□ -1.81
HERVK_113P62684 RNU6-72P-201ENST00000384285 79 ntBASIC3.76□□□□□ -1.81
HERVK_113P62684 RNU6-700P-201ENST00000391043 107 ntBASIC3.76□□□□□ -1.81
HERVK_113P62684 AC007098.1-201ENST00000420122 367 ntBASIC3.76□□□□□ -1.81
HERVK_113P62684 EIF4EP2-201ENST00000422816 654 ntBASIC3.76□□□□□ -1.81
HERVK_113P62684 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.76□□□□□ -1.81
HERVK_113P62684 AC040926.1-201ENST00000530195 238 ntBASIC3.76□□□□□ -1.81
HERVK_113P62684 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HERVK_113P62684 H3F3AP1-201ENST00000559984 334 ntBASIC3.76□□□□□ -1.81
HERVK_113P62684 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.76□□□□□ -1.81
HERVK_113P62684 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.76□□□□□ -1.81
HERVK_113P62684 AC027309.3-201ENST00000623419 351 ntBASIC3.76□□□□□ -1.81
HERVK_113P62684 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.76□□□□□ -1.81
HERVK_113P62684 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HERVK_113P62684 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HERVK_113P62684 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HERVK_113P62684 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.76□□□□□ -1.81
HERVK_113P62684 AL079305.1-201ENST00000623159 3008 ntBASIC3.76□□□□□ -1.81
HERVK_113P62684 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HERVK_113P62684 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HERVK_113P62684 RNU6-78P-201ENST00000362897 107 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 Y_RNA.106-201ENST00000363189 100 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 Y_RNA.152-201ENST00000363578 100 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 Y_RNA.380-201ENST00000365663 111 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HERVK_113P62684 Y_RNA.512-201ENST00000384518 102 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 AC114482.1-201ENST00000418010 247 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.75□□□□□ -1.81
HERVK_113P62684 HMGB3P8-201ENST00000449709 577 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 MTCO3P8-201ENST00000453691 755 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 RPL22P13-201ENST00000493291 347 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 RNU6-1183P-201ENST00000517054 60 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 AC144568.1-201ENST00000520139 137 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.75□□□□□ -1.81
HERVK_113P62684 AC010186.2-204ENST00000537668 439 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms