Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC134050.1-201ENST00000495088 933 ntBASIC0.47□□□□□ -2.33
LSM3P62310 RNA5SP168-201ENST00000516642 112 ntBASIC0.47□□□□□ -2.33
LSM3P62310 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.47□□□□□ -2.33
LSM3P62310 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.47□□□□□ -2.33
LSM3P62310 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.47□□□□□ -2.33
LSM3P62310 AC011604.1-201ENST00000545978 196 ntBASIC0.47□□□□□ -2.33
LSM3P62310 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.47□□□□□ -2.33
LSM3P62310 SNORA59B-202ENST00000578183 701 ntBASIC0.47□□□□□ -2.33
LSM3P62310 MIR5708-201ENST00000579723 85 ntBASIC0.47□□□□□ -2.33
LSM3P62310 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.47□□□□□ -2.33
LSM3P62310 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.47□□□□□ -2.33
LSM3P62310 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.47□□□□□ -2.33
LSM3P62310 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.46□□□□□ -2.34
LSM3P62310 RNU6-487P-201ENST00000365430 104 ntBASIC0.46□□□□□ -2.34
LSM3P62310 SNORA18.2-201ENST00000383865 132 ntBASIC0.46□□□□□ -2.34
LSM3P62310 MIR19B1-201ENST00000384829 87 ntBASIC0.46□□□□□ -2.34
LSM3P62310 SNORA12-201ENST00000391162 147 ntBASIC0.46□□□□□ -2.34
LSM3P62310 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.46□□□□□ -2.34
LSM3P62310 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.46□□□□□ -2.34
LSM3P62310 CBX3P6-201ENST00000430257 527 ntBASIC0.46□□□□□ -2.34
LSM3P62310 FTH1P12-201ENST00000432137 551 ntBASIC0.46□□□□□ -2.34
LSM3P62310 MTND1P30-201ENST00000441241 901 ntBASIC0.46□□□□□ -2.34
LSM3P62310 AC104563.1-201ENST00000476147 376 ntBASIC0.46□□□□□ -2.34
LSM3P62310 AC121161.1-201ENST00000510606 652 ntBASIC0.46□□□□□ -2.34
LSM3P62310 RNU6-1225P-201ENST00000516336 65 ntBASIC0.46□□□□□ -2.34
LSM3P62310 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.46□□□□□ -2.34
LSM3P62310 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.46□□□□□ -2.34
LSM3P62310 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.46□□□□□ -2.34
LSM3P62310 AP001004.1-201ENST00000582468 324 ntBASIC0.46□□□□□ -2.34
LSM3P62310 AL391001.1-201ENST00000602747 715 ntBASIC0.46□□□□□ -2.34
LSM3P62310 BNIP3P10-201ENST00000605360 577 ntBASIC0.46□□□□□ -2.34
LSM3P62310 AP000654.2-201ENST00000605633 586 ntBASIC0.46□□□□□ -2.34
LSM3P62310 MIR3976-201ENST00000606807 139 ntBASIC0.46□□□□□ -2.34
LSM3P62310 AL355816.2-201ENST00000610049 647 ntBASIC0.46□□□□□ -2.34
LSM3P62310 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.46□□□□□ -2.34
LSM3P62310 AP000676.3-201ENST00000623299 569 ntBASIC0.46□□□□□ -2.34
LSM3P62310 AC010615.1-201ENST00000594254 1764 ntBASIC0.46□□□□□ -2.34
LSM3P62310 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.45□□□□□ -2.34
LSM3P62310 MIR373-201ENST00000362273 69 ntBASIC0.45□□□□□ -2.34
LSM3P62310 RNA5SP361-201ENST00000362686 118 ntBASIC0.45□□□□□ -2.34
LSM3P62310 Y_RNA.111-201ENST00000363248 100 ntBASIC0.45□□□□□ -2.34
LSM3P62310 Y_RNA.124-201ENST00000363339 93 ntBASIC0.45□□□□□ -2.34
LSM3P62310 RNU6-1080P-201ENST00000383982 107 ntBASIC0.45□□□□□ -2.34
LSM3P62310 SNORD116-20-201ENST00000384529 92 ntBASIC0.45□□□□□ -2.34
LSM3P62310 Y_RNA.534-201ENST00000384599 112 ntBASIC0.45□□□□□ -2.34
LSM3P62310 UBE2V1P15-201ENST00000407776 448 ntBASIC0.45□□□□□ -2.34
LSM3P62310 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.45□□□□□ -2.34
LSM3P62310 MIR1261-201ENST00000408659 82 ntBASIC0.45□□□□□ -2.34
LSM3P62310 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.45□□□□□ -2.34
LSM3P62310 AC083875.1-201ENST00000419509 405 ntBASIC0.45□□□□□ -2.34
LSM3P62310 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.45□□□□□ -2.34
LSM3P62310 AL591806.2-201ENST00000433122 173 ntBASIC0.45□□□□□ -2.34
LSM3P62310 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.45□□□□□ -2.34
LSM3P62310 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.45□□□□□ -2.34
LSM3P62310 MTND1P16-201ENST00000465177 898 ntBASIC0.45□□□□□ -2.34
LSM3P62310 RPS27P22-201ENST00000478056 241 ntBASIC0.45□□□□□ -2.34
LSM3P62310 BET1P1-201ENST00000482276 359 ntBASIC0.45□□□□□ -2.34
LSM3P62310 RNU6-113P-201ENST00000516653 101 ntBASIC0.45□□□□□ -2.34
LSM3P62310 RN7SKP49-201ENST00000516675 260 ntBASIC0.45□□□□□ -2.34
LSM3P62310 SNORA70.22-201ENST00000517160 124 ntBASIC0.45□□□□□ -2.34
LSM3P62310 RNU6-1315P-201ENST00000517187 99 ntBASIC0.45□□□□□ -2.34
LSM3P62310 AC090142.3-201ENST00000519012 385 ntBASIC0.45□□□□□ -2.34
LSM3P62310 MTND1P36-201ENST00000522384 936 ntBASIC0.45□□□□□ -2.34
LSM3P62310 MTCO3P15-201ENST00000526563 574 ntBASIC0.45□□□□□ -2.34
LSM3P62310 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.45□□□□□ -2.34
LSM3P62310 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.45□□□□□ -2.34
LSM3P62310 AC105129.3-201ENST00000605455 485 ntBASIC0.45□□□□□ -2.34
LSM3P62310 AL079343.1-201ENST00000572358 1771 ntBASIC0.45□□□□□ -2.34
LSM3P62310 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
LSM3P62310 SNORD3E-201ENST00000362899 217 ntBASIC0.44□□□□□ -2.34
LSM3P62310 MIR10B-201ENST00000385011 110 ntBASIC0.44□□□□□ -2.34
LSM3P62310 MTCO1P56-201ENST00000401674 224 ntBASIC0.44□□□□□ -2.34
LSM3P62310 AL357139.1-201ENST00000407792 426 ntBASIC0.44□□□□□ -2.34
LSM3P62310 HMGN1P14-201ENST00000412459 517 ntBASIC0.44□□□□□ -2.34
LSM3P62310 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.44□□□□□ -2.34
LSM3P62310 EBAG9P1-201ENST00000418955 543 ntBASIC0.44□□□□□ -2.34
LSM3P62310 AL158053.1-201ENST00000441503 453 ntBASIC0.44□□□□□ -2.34
LSM3P62310 CALM1P1-201ENST00000442082 433 ntBASIC0.44□□□□□ -2.34
LSM3P62310 SNRPEP8-201ENST00000442866 260 ntBASIC0.44□□□□□ -2.34
LSM3P62310 AC010095.1-201ENST00000443543 144 ntBASIC0.44□□□□□ -2.34
LSM3P62310 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
LSM3P62310 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.44□□□□□ -2.34
LSM3P62310 MTCO3P28-201ENST00000513351 515 ntBASIC0.44□□□□□ -2.34
LSM3P62310 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.44□□□□□ -2.34
LSM3P62310 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
LSM3P62310 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.44□□□□□ -2.34
LSM3P62310 AC022432.1-201ENST00000595739 310 ntBASIC0.44□□□□□ -2.34
LSM3P62310 AC069114.2-201ENST00000604699 304 ntBASIC0.44□□□□□ -2.34
LSM3P62310 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.44□□□□□ -2.34
LSM3P62310 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
LSM3P62310 RNU6-862P-201ENST00000362804 105 ntBASIC0.43□□□□□ -2.34
LSM3P62310 SNORA4.2-201ENST00000365313 147 ntBASIC0.43□□□□□ -2.34
LSM3P62310 RNU6-910P-201ENST00000390844 107 ntBASIC0.43□□□□□ -2.34
LSM3P62310 RPS3AP1-201ENST00000413190 320 ntBASIC0.43□□□□□ -2.34
LSM3P62310 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.43□□□□□ -2.34
LSM3P62310 AC244505.5-201ENST00000443639 207 ntBASIC0.43□□□□□ -2.34
LSM3P62310 FTH1P25-201ENST00000447665 469 ntBASIC0.43□□□□□ -2.34
LSM3P62310 RNU7-59P-201ENST00000459101 61 ntBASIC0.43□□□□□ -2.34
LSM3P62310 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.43□□□□□ -2.34
LSM3P62310 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms