Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.38□□□□□ -2.35
CKS1BP61024 AP003484.1-201ENST00000530974 250 ntBASIC0.38□□□□□ -2.35
CKS1BP61024 AC025423.5-201ENST00000550230 219 ntBASIC0.38□□□□□ -2.35
CKS1BP61024 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.38□□□□□ -2.35
CKS1BP61024 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.38□□□□□ -2.35
CKS1BP61024 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.38□□□□□ -2.35
CKS1BP61024 AC107982.1-201ENST00000507171 1300 ntBASIC0.38□□□□□ -2.35
CKS1BP61024 AC245060.5-201ENST00000610778 3293 ntBASIC0.37□□□□□ -2.35
CKS1BP61024 AL391994.1-201ENST00000254724 282 ntBASIC0.37□□□□□ -2.35
CKS1BP61024 snoU2_19.1-201ENST00000362361 80 ntBASIC0.37□□□□□ -2.35
CKS1BP61024 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
CKS1BP61024 RNU6-952P-201ENST00000391164 108 ntBASIC0.37□□□□□ -2.35
CKS1BP61024 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.37□□□□□ -2.35
CKS1BP61024 AC027644.1-201ENST00000419595 298 ntBASIC0.37□□□□□ -2.35
CKS1BP61024 TXNL1P1-201ENST00000429528 554 ntBASIC0.37□□□□□ -2.35
CKS1BP61024 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.37□□□□□ -2.35
CKS1BP61024 AL591043.1-201ENST00000432461 424 ntBASIC0.37□□□□□ -2.35
CKS1BP61024 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.37□□□□□ -2.35
CKS1BP61024 RNU7-136P-201ENST00000458819 69 ntBASIC0.37□□□□□ -2.35
CKS1BP61024 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.37□□□□□ -2.35
CKS1BP61024 RNA5SP490-201ENST00000517141 136 ntBASIC0.37□□□□□ -2.35
CKS1BP61024 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.37□□□□□ -2.35
CKS1BP61024 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.37□□□□□ -2.35
CKS1BP61024 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.37□□□□□ -2.35
CKS1BP61024 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.37□□□□□ -2.35
CKS1BP61024 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.37□□□□□ -2.35
CKS1BP61024 HSPE1P4-201ENST00000550617 308 ntBASIC0.37□□□□□ -2.35
CKS1BP61024 AC109446.2-201ENST00000567872 497 ntBASIC0.37□□□□□ -2.35
CKS1BP61024 AP001004.1-201ENST00000582468 324 ntBASIC0.37□□□□□ -2.35
CKS1BP61024 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.37□□□□□ -2.35
CKS1BP61024 RNU4-79P-201ENST00000362764 141 ntBASIC0.36□□□□□ -2.35
CKS1BP61024 RNU6-481P-201ENST00000384194 107 ntBASIC0.36□□□□□ -2.35
CKS1BP61024 RNU6-166P-201ENST00000384371 107 ntBASIC0.36□□□□□ -2.35
CKS1BP61024 RNU6-1176P-201ENST00000390955 107 ntBASIC0.36□□□□□ -2.35
CKS1BP61024 Y_RNA.595-201ENST00000410403 105 ntBASIC0.36□□□□□ -2.35
CKS1BP61024 AC083875.1-201ENST00000419509 405 ntBASIC0.36□□□□□ -2.35
CKS1BP61024 DPRXP1-201ENST00000426312 460 ntBASIC0.36□□□□□ -2.35
CKS1BP61024 Z82205.1-201ENST00000428456 297 ntBASIC0.36□□□□□ -2.35
CKS1BP61024 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.36□□□□□ -2.35
CKS1BP61024 SNRPEP7-201ENST00000438350 220 ntBASIC0.36□□□□□ -2.35
CKS1BP61024 snoU13.27-201ENST00000459278 104 ntBASIC0.36□□□□□ -2.35
CKS1BP61024 RPF2P2-201ENST00000504693 896 ntBASIC0.36□□□□□ -2.35
CKS1BP61024 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.36□□□□□ -2.35
CKS1BP61024 AC004812.1-201ENST00000540773 146 ntBASIC0.36□□□□□ -2.35
CKS1BP61024 AC006518.2-201ENST00000542513 940 ntBASIC0.36□□□□□ -2.35
CKS1BP61024 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.36□□□□□ -2.35
CKS1BP61024 AL121579.1-201ENST00000555129 305 ntBASIC0.36□□□□□ -2.35
CKS1BP61024 AC044913.1-201ENST00000557200 430 ntBASIC0.36□□□□□ -2.35
CKS1BP61024 AL391001.1-201ENST00000602747 715 ntBASIC0.36□□□□□ -2.35
CKS1BP61024 RNU6-87P-201ENST00000607561 108 ntBASIC0.36□□□□□ -2.35
CKS1BP61024 MIR6715A-201ENST00000615929 79 ntBASIC0.36□□□□□ -2.35
CKS1BP61024 AL356094.1-201ENST00000624663 1212 ntBASIC0.36□□□□□ -2.35
CKS1BP61024 RNU6-212P-201ENST00000362642 104 ntBASIC0.35□□□□□ -2.35
CKS1BP61024 RNU6-1019P-201ENST00000364424 107 ntBASIC0.35□□□□□ -2.35
CKS1BP61024 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.35□□□□□ -2.35
CKS1BP61024 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.35□□□□□ -2.35
CKS1BP61024 AL008629.1-201ENST00000438615 184 ntBASIC0.35□□□□□ -2.35
CKS1BP61024 GXYLT1P1-201ENST00000446657 490 ntBASIC0.35□□□□□ -2.35
CKS1BP61024 AL606517.1-201ENST00000446914 387 ntBASIC0.35□□□□□ -2.35
CKS1BP61024 ELOCP30-201ENST00000447108 299 ntBASIC0.35□□□□□ -2.35
CKS1BP61024 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.35□□□□□ -2.35
CKS1BP61024 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.35□□□□□ -2.35
CKS1BP61024 HMGB1P30-201ENST00000492455 606 ntBASIC0.35□□□□□ -2.35
CKS1BP61024 AC108078.2-201ENST00000510750 236 ntBASIC0.35□□□□□ -2.35
CKS1BP61024 RN7SKP49-201ENST00000516675 260 ntBASIC0.35□□□□□ -2.35
CKS1BP61024 AC104417.1-201ENST00000523974 751 ntBASIC0.35□□□□□ -2.35
CKS1BP61024 AL590705.4-201ENST00000532209 134 ntBASIC0.35□□□□□ -2.35
CKS1BP61024 CR383656.8-201ENST00000549046 145 ntBASIC0.35□□□□□ -2.35
CKS1BP61024 AC018659.1-201ENST00000551083 169 ntBASIC0.35□□□□□ -2.35
CKS1BP61024 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.35□□□□□ -2.35
CKS1BP61024 CYP4A27P-201ENST00000567218 190 ntBASIC0.35□□□□□ -2.35
CKS1BP61024 AC104984.5-201ENST00000586878 94 ntBASIC0.35□□□□□ -2.35
CKS1BP61024 BNIP3P9-201ENST00000603714 553 ntBASIC0.35□□□□□ -2.35
CKS1BP61024 AC100814.1-201ENST00000606963 623 ntBASIC0.35□□□□□ -2.35
CKS1BP61024 AL157770.1-201ENST00000623049 439 ntBASIC0.35□□□□□ -2.35
CKS1BP61024 AC106858.1-201ENST00000637497 429 ntBASIC0.35□□□□□ -2.35
CKS1BP61024 Y_RNA.124-201ENST00000363339 93 ntBASIC0.34□□□□□ -2.36
CKS1BP61024 MIR10B-201ENST00000385011 110 ntBASIC0.34□□□□□ -2.36
CKS1BP61024 AL158050.1-201ENST00000416077 457 ntBASIC0.34□□□□□ -2.36
CKS1BP61024 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.34□□□□□ -2.36
CKS1BP61024 AC099677.2-201ENST00000436385 175 ntBASIC0.34□□□□□ -2.36
CKS1BP61024 AC002429.1-201ENST00000437672 148 ntBASIC0.34□□□□□ -2.36
CKS1BP61024 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.34□□□□□ -2.36
CKS1BP61024 MTND1P30-201ENST00000441241 901 ntBASIC0.34□□□□□ -2.36
CKS1BP61024 AL358794.1-201ENST00000445689 381 ntBASIC0.34□□□□□ -2.36
CKS1BP61024 FTH1P25-201ENST00000447665 469 ntBASIC0.34□□□□□ -2.36
CKS1BP61024 AC003071.1-201ENST00000451219 789 ntBASIC0.34□□□□□ -2.36
CKS1BP61024 AC108059.3-201ENST00000456388 214 ntBASIC0.34□□□□□ -2.36
CKS1BP61024 RPL39P36-201ENST00000490784 156 ntBASIC0.34□□□□□ -2.36
CKS1BP61024 AC009646.1-201ENST00000510455 318 ntBASIC0.34□□□□□ -2.36
CKS1BP61024 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.34□□□□□ -2.36
CKS1BP61024 SNRPGP1-201ENST00000553864 222 ntBASIC0.34□□□□□ -2.36
CKS1BP61024 HIGD1AP17-201ENST00000554576 276 ntBASIC0.34□□□□□ -2.36
CKS1BP61024 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.34□□□□□ -2.36
CKS1BP61024 AL133153.1-201ENST00000557756 303 ntBASIC0.34□□□□□ -2.36
CKS1BP61024 AC091489.2-201ENST00000566263 604 ntBASIC0.34□□□□□ -2.36
CKS1BP61024 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.34□□□□□ -2.36
CKS1BP61024 AC068790.6-201ENST00000602558 258 ntBASIC0.34□□□□□ -2.36
CKS1BP61024 AC016727.1-205ENST00000605437 569 ntBASIC0.34□□□□□ -2.36
CKS1BP61024 AP001596.2-201ENST00000608410 312 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms