Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.97□□□□□ -1.77
ERVFC1P60507 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ERVFC1P60507 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.97□□□□□ -1.77
ERVFC1P60507 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ERVFC1P60507 RNU6-858P-201ENST00000362436 107 ntBASIC3.97□□□□□ -1.77
ERVFC1P60507 RNU6-173P-201ENST00000364215 104 ntBASIC3.97□□□□□ -1.77
ERVFC1P60507 Y_RNA.275-201ENST00000364726 110 ntBASIC3.97□□□□□ -1.77
ERVFC1P60507 RNU6-336P-201ENST00000364891 107 ntBASIC3.97□□□□□ -1.77
ERVFC1P60507 RNU6-166P-201ENST00000384371 107 ntBASIC3.97□□□□□ -1.77
ERVFC1P60507 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.97□□□□□ -1.77
ERVFC1P60507 HLA-N-201ENST00000437516 135 ntBASIC3.97□□□□□ -1.77
ERVFC1P60507 AC016700.2-201ENST00000446011 156 ntBASIC3.97□□□□□ -1.77
ERVFC1P60507 AC091021.1-201ENST00000468051 388 ntBASIC3.97□□□□□ -1.77
ERVFC1P60507 AL049874.1-201ENST00000489560 388 ntBASIC3.97□□□□□ -1.77
ERVFC1P60507 RNU2-58P-201ENST00000516403 183 ntBASIC3.97□□□□□ -1.77
ERVFC1P60507 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.97□□□□□ -1.77
ERVFC1P60507 AC022559.1-201ENST00000520905 205 ntBASIC3.97□□□□□ -1.77
ERVFC1P60507 AP004242.1-201ENST00000533701 349 ntBASIC3.97□□□□□ -1.77
ERVFC1P60507 MIR4423-201ENST00000580922 80 ntBASIC3.97□□□□□ -1.77
ERVFC1P60507 AC010928.2-201ENST00000588017 287 ntBASIC3.97□□□□□ -1.77
ERVFC1P60507 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.97□□□□□ -1.77
ERVFC1P60507 AC037487.3-201ENST00000606668 112 ntBASIC3.97□□□□□ -1.77
ERVFC1P60507 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.97□□□□□ -1.77
ERVFC1P60507 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.97□□□□□ -1.77
ERVFC1P60507 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
ERVFC1P60507 AL049781.1-201ENST00000623195 3585 ntBASIC3.97□□□□□ -1.77
ERVFC1P60507 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.97□□□□□ -1.77
ERVFC1P60507 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.97□□□□□ -1.77
ERVFC1P60507 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ERVFC1P60507 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ERVFC1P60507 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ERVFC1P60507 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ERVFC1P60507 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ERVFC1P60507 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
ERVFC1P60507 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.96□□□□□ -1.77
ERVFC1P60507 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
ERVFC1P60507 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.96□□□□□ -1.77
ERVFC1P60507 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ERVFC1P60507 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
ERVFC1P60507 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
ERVFC1P60507 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ERVFC1P60507 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
ERVFC1P60507 UBE2WP1-201ENST00000362030 340 ntBASIC3.96□□□□□ -1.78
ERVFC1P60507 SNORD9-201ENST00000362566 104 ntBASIC3.96□□□□□ -1.78
ERVFC1P60507 RNA5SP50-201ENST00000363731 107 ntBASIC3.96□□□□□ -1.78
ERVFC1P60507 SNORD115-32-201ENST00000364079 82 ntBASIC3.96□□□□□ -1.78
ERVFC1P60507 Y_RNA.233-201ENST00000364407 101 ntBASIC3.96□□□□□ -1.78
ERVFC1P60507 Y_RNA.245-201ENST00000364493 95 ntBASIC3.96□□□□□ -1.78
ERVFC1P60507 Y_RNA.435-201ENST00000384095 112 ntBASIC3.96□□□□□ -1.78
ERVFC1P60507 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
ERVFC1P60507 RNA5SP213-201ENST00000391031 106 ntBASIC3.96□□□□□ -1.78
ERVFC1P60507 BTF3L4P2-201ENST00000392798 346 ntBASIC3.96□□□□□ -1.78
ERVFC1P60507 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ERVFC1P60507 RNU5A-5P-201ENST00000411054 116 ntBASIC3.96□□□□□ -1.78
ERVFC1P60507 Z82188.1-201ENST00000436709 154 ntBASIC3.96□□□□□ -1.78
ERVFC1P60507 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.96□□□□□ -1.78
ERVFC1P60507 SNORD105B-201ENST00000458770 79 ntBASIC3.96□□□□□ -1.78
ERVFC1P60507 AC008155.2-201ENST00000464337 397 ntBASIC3.96□□□□□ -1.78
ERVFC1P60507 TOMM22P6-201ENST00000465035 409 ntBASIC3.96□□□□□ -1.78
ERVFC1P60507 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.96□□□□□ -1.78
ERVFC1P60507 AC078918.1-201ENST00000498515 228 ntBASIC3.96□□□□□ -1.78
ERVFC1P60507 AC005921.1-201ENST00000510589 286 ntBASIC3.96□□□□□ -1.78
ERVFC1P60507 RNU6-346P-201ENST00000516288 111 ntBASIC3.96□□□□□ -1.78
ERVFC1P60507 RN7SKP57-201ENST00000517248 293 ntBASIC3.96□□□□□ -1.78
ERVFC1P60507 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.96□□□□□ -1.78
ERVFC1P60507 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.96□□□□□ -1.78
ERVFC1P60507 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.96□□□□□ -1.78
ERVFC1P60507 MRPS18CP4-201ENST00000535821 231 ntBASIC3.96□□□□□ -1.78
ERVFC1P60507 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.96□□□□□ -1.78
ERVFC1P60507 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.96□□□□□ -1.78
ERVFC1P60507 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.96□□□□□ -1.78
ERVFC1P60507 MIR3144-201ENST00000579460 79 ntBASIC3.96□□□□□ -1.78
ERVFC1P60507 RMST_6.1-201ENST00000611980 203 ntBASIC3.96□□□□□ -1.78
ERVFC1P60507 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.96□□□□□ -1.78
ERVFC1P60507 AL359693.1-201ENST00000614959 2407 ntBASIC3.96□□□□□ -1.78
ERVFC1P60507 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
ERVFC1P60507 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
ERVFC1P60507 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ERVFC1P60507 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ERVFC1P60507 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
ERVFC1P60507 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
ERVFC1P60507 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.95□□□□□ -1.78
ERVFC1P60507 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ERVFC1P60507 RNU5E-7P-201ENST00000365290 117 ntBASIC3.95□□□□□ -1.78
ERVFC1P60507 RNU6-318P-201ENST00000384283 103 ntBASIC3.95□□□□□ -1.78
ERVFC1P60507 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
ERVFC1P60507 RNU6-918P-201ENST00000391219 106 ntBASIC3.95□□□□□ -1.78
ERVFC1P60507 RNU1-139P-201ENST00000391307 165 ntBASIC3.95□□□□□ -1.78
ERVFC1P60507 NDUFB4P7-201ENST00000423198 363 ntBASIC3.95□□□□□ -1.78
ERVFC1P60507 CYCSP4-201ENST00000429682 331 ntBASIC3.95□□□□□ -1.78
ERVFC1P60507 RPL23AP75-201ENST00000491601 451 ntBASIC3.95□□□□□ -1.78
ERVFC1P60507 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.95□□□□□ -1.78
ERVFC1P60507 SNORA31.18-201ENST00000517043 134 ntBASIC3.95□□□□□ -1.78
ERVFC1P60507 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.95□□□□□ -1.78
ERVFC1P60507 GNRHR2P1-201ENST00000555315 631 ntBASIC3.95□□□□□ -1.78
ERVFC1P60507 CYP4A43P-201ENST00000568156 121 ntBASIC3.95□□□□□ -1.78
ERVFC1P60507 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.95□□□□□ -1.78
ERVFC1P60507 MIR3921-201ENST00000577308 85 ntBASIC3.95□□□□□ -1.78
ERVFC1P60507 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.95□□□□□ -1.78
ERVFC1P60507 HAUS6P2-201ENST00000433254 2404 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms