Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RHBDL3P58872 RNU6-1215P-201ENST00000384441 102 ntBASIC3.18□□□□□ -1.9
RHBDL3P58872 MIR514A2-201ENST00000385131 88 ntBASIC3.18□□□□□ -1.9
RHBDL3P58872 MIR514A3-201ENST00000385132 88 ntBASIC3.18□□□□□ -1.9
RHBDL3P58872 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.18□□□□□ -1.9
RHBDL3P58872 AC009963.1-201ENST00000417265 157 ntBASIC3.18□□□□□ -1.9
RHBDL3P58872 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.18□□□□□ -1.9
RHBDL3P58872 AL161788.1-201ENST00000441805 169 ntBASIC3.18□□□□□ -1.9
RHBDL3P58872 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.18□□□□□ -1.9
RHBDL3P58872 AC096725.1-201ENST00000514266 313 ntBASIC3.18□□□□□ -1.9
RHBDL3P58872 RNA5SP148-201ENST00000516527 94 ntBASIC3.18□□□□□ -1.9
RHBDL3P58872 Y_RNA.704-201ENST00000516851 102 ntBASIC3.18□□□□□ -1.9
RHBDL3P58872 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.18□□□□□ -1.9
RHBDL3P58872 MIR3605-201ENST00000583214 100 ntBASIC3.18□□□□□ -1.9
RHBDL3P58872 AC091135.1-201ENST00000585943 307 ntBASIC3.18□□□□□ -1.9
RHBDL3P58872 AL356157.2-201ENST00000605122 111 ntBASIC3.18□□□□□ -1.9
RHBDL3P58872 AC013412.1-201ENST00000610687 192 ntBASIC3.18□□□□□ -1.9
RHBDL3P58872 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.18□□□□□ -1.9
RHBDL3P58872 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.18□□□□□ -1.9
RHBDL3P58872 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RHBDL3P58872 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
RHBDL3P58872 RPL9P7-201ENST00000330965 580 ntBASIC3.17□□□□□ -1.9
RHBDL3P58872 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.17□□□□□ -1.9
RHBDL3P58872 AL117339.3-201ENST00000418733 162 ntBASIC3.17□□□□□ -1.9
RHBDL3P58872 RPS15AP10-201ENST00000432472 382 ntBASIC3.17□□□□□ -1.9
RHBDL3P58872 ERLEC1P1-201ENST00000433806 578 ntBASIC3.17□□□□□ -1.9
RHBDL3P58872 AL513328.1-201ENST00000446460 224 ntBASIC3.17□□□□□ -1.9
RHBDL3P58872 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.17□□□□□ -1.9
RHBDL3P58872 AK3P2-201ENST00000507976 429 ntBASIC3.17□□□□□ -1.9
RHBDL3P58872 AP005902.1-201ENST00000521358 186 ntBASIC3.17□□□□□ -1.9
RHBDL3P58872 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.17□□□□□ -1.9
RHBDL3P58872 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.17□□□□□ -1.9
RHBDL3P58872 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.17□□□□□ -1.9
RHBDL3P58872 MIR4446-201ENST00000578505 67 ntBASIC3.17□□□□□ -1.9
RHBDL3P58872 AL355297.2-201ENST00000604792 129 ntBASIC3.17□□□□□ -1.9
RHBDL3P58872 AC116312.1-201ENST00000606841 314 ntBASIC3.17□□□□□ -1.9
RHBDL3P58872 AC092608.2-201ENST00000624427 218 ntBASIC3.17□□□□□ -1.9
RHBDL3P58872 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RHBDL3P58872 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.16□□□□□ -1.9
RHBDL3P58872 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
RHBDL3P58872 Y_RNA.6-201ENST00000362350 114 ntBASIC3.16□□□□□ -1.9
RHBDL3P58872 EIF4E2P1-201ENST00000393781 255 ntBASIC3.16□□□□□ -1.9
RHBDL3P58872 RPS29P13-201ENST00000402041 169 ntBASIC3.16□□□□□ -1.9
RHBDL3P58872 CBX3P9-201ENST00000402326 552 ntBASIC3.16□□□□□ -1.9
RHBDL3P58872 RNU6-908P-201ENST00000410160 94 ntBASIC3.16□□□□□ -1.9
RHBDL3P58872 RNU6-1140P-201ENST00000410517 106 ntBASIC3.16□□□□□ -1.9
RHBDL3P58872 RN7SKP284-201ENST00000411002 343 ntBASIC3.16□□□□□ -1.9
RHBDL3P58872 MTCO1P20-201ENST00000425366 358 ntBASIC3.16□□□□□ -1.9
RHBDL3P58872 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.16□□□□□ -1.9
RHBDL3P58872 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.16□□□□□ -1.9
RHBDL3P58872 AC010486.1-201ENST00000511793 424 ntBASIC3.16□□□□□ -1.9
RHBDL3P58872 SNORA19.2-201ENST00000516013 114 ntBASIC3.16□□□□□ -1.9
RHBDL3P58872 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.16□□□□□ -1.9
RHBDL3P58872 AF250324.2-201ENST00000608299 610 ntBASIC3.16□□□□□ -1.9
RHBDL3P58872 AC092807.2-201ENST00000609367 243 ntBASIC3.16□□□□□ -1.9
RHBDL3P58872 AC009233.1-201ENST00000616477 371 ntBASIC3.16□□□□□ -1.9
RHBDL3P58872 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.16□□□□□ -1.9
RHBDL3P58872 MIR203B-201ENST00000636080 86 ntBASIC3.16□□□□□ -1.9
RHBDL3P58872 Z82209.1-201ENST00000422141 2135 ntBASIC3.16□□□□□ -1.9
RHBDL3P58872 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RHBDL3P58872 AC108206.1-201ENST00000570186 4159 ntBASIC3.15□□□□□ -1.9
RHBDL3P58872 AC131280.1-202ENST00000624067 4211 ntBASIC3.15□□□□□ -1.91
RHBDL3P58872 RNY3P3-201ENST00000363816 102 ntBASIC3.15□□□□□ -1.91
RHBDL3P58872 RNU6-336P-201ENST00000364891 107 ntBASIC3.15□□□□□ -1.91
RHBDL3P58872 RNU4-20P-201ENST00000365601 151 ntBASIC3.15□□□□□ -1.91
RHBDL3P58872 MIR544A-201ENST00000384855 91 ntBASIC3.15□□□□□ -1.91
RHBDL3P58872 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RHBDL3P58872 RNU6-780P-201ENST00000391030 104 ntBASIC3.15□□□□□ -1.91
RHBDL3P58872 RNU6-1068P-201ENST00000410958 103 ntBASIC3.15□□□□□ -1.91
RHBDL3P58872 RNU6-293P-201ENST00000411259 106 ntBASIC3.15□□□□□ -1.91
RHBDL3P58872 SNRPEP10-201ENST00000420249 274 ntBASIC3.15□□□□□ -1.91
RHBDL3P58872 AC008267.5-201ENST00000424928 265 ntBASIC3.15□□□□□ -1.91
RHBDL3P58872 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.15□□□□□ -1.91
RHBDL3P58872 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.15□□□□□ -1.91
RHBDL3P58872 MTCO2P3-201ENST00000442543 421 ntBASIC3.15□□□□□ -1.91
RHBDL3P58872 RPL30P12-201ENST00000474666 353 ntBASIC3.15□□□□□ -1.91
RHBDL3P58872 AL121594.1-201ENST00000475906 575 ntBASIC3.15□□□□□ -1.91
RHBDL3P58872 TBCAP3-201ENST00000512475 312 ntBASIC3.15□□□□□ -1.91
RHBDL3P58872 SNORA48.11-201ENST00000517015 89 ntBASIC3.15□□□□□ -1.91
RHBDL3P58872 RNU1-104P-201ENST00000517280 175 ntBASIC3.15□□□□□ -1.91
RHBDL3P58872 MTND1P5-201ENST00000517906 940 ntBASIC3.15□□□□□ -1.91
RHBDL3P58872 AK6P1-201ENST00000540219 478 ntBASIC3.15□□□□□ -1.91
RHBDL3P58872 TPRKBP2-201ENST00000565969 475 ntBASIC3.15□□□□□ -1.91
RHBDL3P58872 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.15□□□□□ -1.91
RHBDL3P58872 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.15□□□□□ -1.91
RHBDL3P58872 AL713866.2-201ENST00000603579 219 ntBASIC3.15□□□□□ -1.91
RHBDL3P58872 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RHBDL3P58872 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RHBDL3P58872 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RHBDL3P58872 AC121333.1-201ENST00000567488 2709 ntBASIC3.14□□□□□ -1.91
RHBDL3P58872 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.14□□□□□ -1.91
RHBDL3P58872 RNU1-72P-201ENST00000362976 153 ntBASIC3.14□□□□□ -1.91
RHBDL3P58872 RNY4P14-201ENST00000363656 96 ntBASIC3.14□□□□□ -1.91
RHBDL3P58872 Y_RNA.378-201ENST00000365652 113 ntBASIC3.14□□□□□ -1.91
RHBDL3P58872 MIR95-201ENST00000385072 81 ntBASIC3.14□□□□□ -1.91
RHBDL3P58872 RNU4-26P-201ENST00000410270 107 ntBASIC3.14□□□□□ -1.91
RHBDL3P58872 RPL32P28-201ENST00000443577 397 ntBASIC3.14□□□□□ -1.91
RHBDL3P58872 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.14□□□□□ -1.91
RHBDL3P58872 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.14□□□□□ -1.91
RHBDL3P58872 RNU6-1069P-201ENST00000516612 133 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms