Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.3□□□□□ -2.04
PEX3P56589 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.3□□□□□ -2.04
PEX3P56589 AC012557.2-201ENST00000605919 418 ntBASIC2.3□□□□□ -2.04
PEX3P56589 AC004492.1-201ENST00000607036 742 ntBASIC2.3□□□□□ -2.04
PEX3P56589 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.3□□□□□ -2.04
PEX3P56589 U4.5-201ENST00000617137 123 ntBASIC2.3□□□□□ -2.04
PEX3P56589 RMST_7.1-201ENST00000621935 268 ntBASIC2.3□□□□□ -2.04
PEX3P56589 AL031601.2-202ENST00000622650 282 ntBASIC2.3□□□□□ -2.04
PEX3P56589 AC005858.4-201ENST00000623191 700 ntBASIC2.3□□□□□ -2.04
PEX3P56589 AC138627.2-201ENST00000624202 601 ntBASIC2.3□□□□□ -2.04
PEX3P56589 MIR1321-201ENST00000637766 79 ntBASIC2.3□□□□□ -2.04
PEX3P56589 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PEX3P56589 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
PEX3P56589 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.29□□□□□ -2.04
PEX3P56589 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
PEX3P56589 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.29□□□□□ -2.04
PEX3P56589 RNU6-38P-201ENST00000384085 107 ntBASIC2.29□□□□□ -2.04
PEX3P56589 RNU6-483P-201ENST00000384088 108 ntBASIC2.29□□□□□ -2.04
PEX3P56589 RNU6-434P-201ENST00000384376 107 ntBASIC2.29□□□□□ -2.04
PEX3P56589 RNU6-748P-201ENST00000384648 107 ntBASIC2.29□□□□□ -2.04
PEX3P56589 FTH1P15-201ENST00000406984 280 ntBASIC2.29□□□□□ -2.04
PEX3P56589 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.29□□□□□ -2.04
PEX3P56589 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.29□□□□□ -2.04
PEX3P56589 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.29□□□□□ -2.04
PEX3P56589 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.29□□□□□ -2.04
PEX3P56589 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.29□□□□□ -2.04
PEX3P56589 CALM1P1-201ENST00000442082 433 ntBASIC2.29□□□□□ -2.04
PEX3P56589 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.29□□□□□ -2.04
PEX3P56589 AL031659.1-201ENST00000447075 539 ntBASIC2.29□□□□□ -2.04
PEX3P56589 RNU6-333P-201ENST00000459117 107 ntBASIC2.29□□□□□ -2.04
PEX3P56589 RPL23AP70-201ENST00000483361 460 ntBASIC2.29□□□□□ -2.04
PEX3P56589 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.29□□□□□ -2.04
PEX3P56589 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.29□□□□□ -2.04
PEX3P56589 AC074344.1-201ENST00000512823 224 ntBASIC2.29□□□□□ -2.04
PEX3P56589 Y_RNA.687-201ENST00000516558 91 ntBASIC2.29□□□□□ -2.04
PEX3P56589 Y_RNA.704-201ENST00000516851 102 ntBASIC2.29□□□□□ -2.04
PEX3P56589 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.29□□□□□ -2.04
PEX3P56589 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.29□□□□□ -2.04
PEX3P56589 AL118558.2-201ENST00000556294 238 ntBASIC2.29□□□□□ -2.04
PEX3P56589 ZNF519P2-201ENST00000557032 169 ntBASIC2.29□□□□□ -2.04
PEX3P56589 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PEX3P56589 OR1M4P-201ENST00000589199 287 ntBASIC2.29□□□□□ -2.04
PEX3P56589 AC008121.1-201ENST00000603244 268 ntBASIC2.29□□□□□ -2.04
PEX3P56589 AC080078.2-201ENST00000603766 501 ntBASIC2.29□□□□□ -2.04
PEX3P56589 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PEX3P56589 uc_338.34-201ENST00000617467 174 ntBASIC2.29□□□□□ -2.04
PEX3P56589 Z69720.2-201ENST00000624755 279 ntBASIC2.29□□□□□ -2.04
PEX3P56589 AC068137.3-201ENST00000639191 341 ntBASIC2.29□□□□□ -2.04
PEX3P56589 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.28□□□□□ -2.04
PEX3P56589 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.28□□□□□ -2.04
PEX3P56589 RNU6-451P-201ENST00000362921 107 ntBASIC2.28□□□□□ -2.04
PEX3P56589 SET-203ENST00000372688 801 ntTSL 2 BASIC2.28□□□□□ -2.04
PEX3P56589 SNORA51.11-201ENST00000384442 131 ntBASIC2.28□□□□□ -2.04
PEX3P56589 RNU6-192P-201ENST00000391253 100 ntBASIC2.28□□□□□ -2.04
PEX3P56589 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PEX3P56589 AL139156.1-201ENST00000412785 841 ntBASIC2.28□□□□□ -2.04
PEX3P56589 MTCO1P21-201ENST00000416634 589 ntBASIC2.28□□□□□ -2.04
PEX3P56589 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.28□□□□□ -2.04
PEX3P56589 MICF-203ENST00000432679 129 ntBASIC2.28□□□□□ -2.04
PEX3P56589 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.28□□□□□ -2.04
PEX3P56589 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.28□□□□□ -2.04
PEX3P56589 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.28□□□□□ -2.04
PEX3P56589 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.28□□□□□ -2.04
PEX3P56589 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.28□□□□□ -2.04
PEX3P56589 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.28□□□□□ -2.04
PEX3P56589 DYNLL1P5-201ENST00000467158 270 ntBASIC2.28□□□□□ -2.04
PEX3P56589 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.28□□□□□ -2.04
PEX3P56589 IGKV3-31-201ENST00000523109 329 ntBASIC2.28□□□□□ -2.04
PEX3P56589 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.28□□□□□ -2.04
PEX3P56589 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.28□□□□□ -2.04
PEX3P56589 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.28□□□□□ -2.04
PEX3P56589 BNIP3P6-201ENST00000549284 499 ntBASIC2.28□□□□□ -2.04
PEX3P56589 OR11H5P-201ENST00000554039 926 ntBASIC2.28□□□□□ -2.04
PEX3P56589 AC103810.1-201ENST00000579873 453 ntBASIC2.28□□□□□ -2.04
PEX3P56589 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.28□□□□□ -2.04
PEX3P56589 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.28□□□□□ -2.04
PEX3P56589 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.28□□□□□ -2.04
PEX3P56589 SCARNA4-202ENST00000625402 129 ntBASIC2.28□□□□□ -2.04
PEX3P56589 FER-210ENST00000628534 558 ntTSL 5 BASIC2.28□□□□□ -2.04
PEX3P56589 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.27□□□□□ -2.05
PEX3P56589 RNU6-461P-201ENST00000364195 107 ntBASIC2.27□□□□□ -2.05
PEX3P56589 AL079342.1-201ENST00000401460 267 ntBASIC2.27□□□□□ -2.05
PEX3P56589 PRPS1P1-201ENST00000445305 876 ntBASIC2.27□□□□□ -2.05
PEX3P56589 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.27□□□□□ -2.05
PEX3P56589 RNU7-167P-201ENST00000459160 62 ntBASIC2.27□□□□□ -2.05
PEX3P56589 AC087884.1-201ENST00000469738 328 ntBASIC2.27□□□□□ -2.05
PEX3P56589 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.27□□□□□ -2.05
PEX3P56589 RNU6-314P-201ENST00000516574 104 ntBASIC2.27□□□□□ -2.05
PEX3P56589 AP004607.1-201ENST00000524456 203 ntBASIC2.27□□□□□ -2.05
PEX3P56589 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.27□□□□□ -2.05
PEX3P56589 AC090616.3-201ENST00000582184 217 ntBASIC2.27□□□□□ -2.05
PEX3P56589 AC068790.6-201ENST00000602558 258 ntBASIC2.27□□□□□ -2.05
PEX3P56589 AC146944.4-201ENST00000602697 718 ntBASIC2.27□□□□□ -2.05
PEX3P56589 AL162413.1-201ENST00000603198 110 ntBASIC2.27□□□□□ -2.05
PEX3P56589 AC122108.2-201ENST00000611946 526 ntBASIC2.27□□□□□ -2.05
PEX3P56589 uc_338.14-201ENST00000613162 166 ntBASIC2.27□□□□□ -2.05
PEX3P56589 Y_RNA.783-201ENST00000613546 102 ntBASIC2.27□□□□□ -2.05
PEX3P56589 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.27□□□□□ -2.05
PEX3P56589 YWHAEP7-203ENST00000622054 312 ntBASIC2.27□□□□□ -2.05
PEX3P56589 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms