Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 MTAPP1-201ENST00000489154 819 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 RNU1-86P-201ENST00000516108 154 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 RNU1-107P-201ENST00000516617 154 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 RNU6-572P-201ENST00000516724 80 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.27□□□□□ -2.05
HMGCS2P54868 AL512360.1-201ENST00000555346 234 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 AC025678.1-201ENST00000567861 338 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 MIR5583-1-201ENST00000580941 59 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 MIR4424-201ENST00000585257 86 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.27□□□□□ -2.05
HMGCS2P54868 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.27□□□□□ -2.05
HMGCS2P54868 AC016727.1-205ENST00000605437 569 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 uc_338.11-201ENST00000619132 160 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 AC010297.1-201ENST00000623948 149 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.27□□□□□ -2.05
HMGCS2P54868 AC110491.1-201ENST00000562191 2010 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HMGCS2P54868 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.26□□□□□ -2.05
HMGCS2P54868 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HMGCS2P54868 MIRLET7G-201ENST00000362280 84 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 Y_RNA.6-201ENST00000362350 114 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 RNU6-715P-201ENST00000365204 103 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.26□□□□□ -2.05
HMGCS2P54868 SNORA69-201ENST00000383895 132 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 RNU6-517P-201ENST00000384362 110 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 Y_RNA.481-201ENST00000384373 102 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 RNU6-1127P-201ENST00000384580 107 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 RNU6-658P-201ENST00000384606 106 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 MIR518D-201ENST00000385014 87 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 SNORA17.3-201ENST00000391159 129 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 MIR548F1-201ENST00000408667 84 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 RNU6-908P-201ENST00000410160 94 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 RNU2-49P-201ENST00000410666 184 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 RPL21P90-201ENST00000415692 466 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 HMGB1P9-201ENST00000429856 646 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.26□□□□□ -2.05
HMGCS2P54868 RNU7-26P-201ENST00000458980 63 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 RNU6-261P-201ENST00000459506 102 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.26□□□□□ -2.05
HMGCS2P54868 AC104435.1-201ENST00000483483 166 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.26□□□□□ -2.05
HMGCS2P54868 RNU5F-8P-201ENST00000515941 111 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 SCARNA17.1-201ENST00000516211 143 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 SCARNA17.2-201ENST00000516334 143 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.26□□□□□ -2.05
HMGCS2P54868 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.26□□□□□ -2.05
HMGCS2P54868 OR5AQ1P-201ENST00000527596 927 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.26□□□□□ -2.05
HMGCS2P54868 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.26□□□□□ -2.05
HMGCS2P54868 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.26□□□□□ -2.05
HMGCS2P54868 HIF1AP1-201ENST00000553642 175 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 OR11H5P-201ENST00000554039 926 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.26□□□□□ -2.05
HMGCS2P54868 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.26□□□□□ -2.05
HMGCS2P54868 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.26□□□□□ -2.05
HMGCS2P54868 AL138976.2-201ENST00000563989 694 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 MIR4446-201ENST00000578505 67 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 MIR548AC-201ENST00000585049 88 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.26□□□□□ -2.05
HMGCS2P54868 AL138889.2-201ENST00000603883 242 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 AL355598.1-201ENST00000604169 202 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 SCARNA17.4-201ENST00000614296 143 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 AC090517.2-201ENST00000614966 680 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.26□□□□□ -2.05
HMGCS2P54868 FO624990.1-201ENST00000636373 85 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 AC068137.3-201ENST00000639191 341 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 AC073869.6-201ENST00000640656 341 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 AC010329.5-201ENST00000623497 2174 ntBASIC2.26□□□□□ -2.05
HMGCS2P54868 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.25□□□□□ -2.05
HMGCS2P54868 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HMGCS2P54868 RNU6-1090P-201ENST00000364065 94 ntBASIC2.25□□□□□ -2.05
HMGCS2P54868 RNU6-384P-201ENST00000364900 104 ntBASIC2.25□□□□□ -2.05
HMGCS2P54868 RNU6-1083P-201ENST00000384022 107 ntBASIC2.25□□□□□ -2.05
HMGCS2P54868 RNU6-750P-201ENST00000390946 107 ntBASIC2.25□□□□□ -2.05
HMGCS2P54868 AL590002.1-201ENST00000406554 418 ntBASIC2.25□□□□□ -2.05
HMGCS2P54868 RNU6-648P-201ENST00000410190 107 ntBASIC2.25□□□□□ -2.05
HMGCS2P54868 Y_RNA.595-201ENST00000410403 105 ntBASIC2.25□□□□□ -2.05
HMGCS2P54868 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGCS2P54868 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.25□□□□□ -2.05
HMGCS2P54868 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGCS2P54868 HMGN2P10-201ENST00000448085 265 ntBASIC2.25□□□□□ -2.05
HMGCS2P54868 AC003071.1-201ENST00000451219 789 ntBASIC2.25□□□□□ -2.05
HMGCS2P54868 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGCS2P54868 AL583843.1-201ENST00000456070 346 ntBASIC2.25□□□□□ -2.05
HMGCS2P54868 AC107626.1-201ENST00000471084 183 ntBASIC2.25□□□□□ -2.05
HMGCS2P54868 CCDC34P1-201ENST00000507441 517 ntBASIC2.25□□□□□ -2.05
HMGCS2P54868 MTND3P25-201ENST00000509243 135 ntBASIC2.25□□□□□ -2.05
HMGCS2P54868 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.25□□□□□ -2.05
HMGCS2P54868 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.25□□□□□ -2.05
HMGCS2P54868 AC011352.1-201ENST00000512300 793 ntBASIC2.25□□□□□ -2.05
HMGCS2P54868 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.25□□□□□ -2.05
HMGCS2P54868 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.25□□□□□ -2.05
HMGCS2P54868 AC021739.1-201ENST00000559631 174 ntBASIC2.25□□□□□ -2.05
HMGCS2P54868 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGCS2P54868 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGCS2P54868 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGCS2P54868 U6.99-201ENST00000637524 83 ntBASIC2.25□□□□□ -2.05
HMGCS2P54868 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HMGCS2P54868 AC093536.2-201ENST00000565257 1406 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms