Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 HSPE1P19-201ENST00000603327 295 ntBASIC0.8□□□□□ -2.28
NUP98P52948 AC069545.1-201ENST00000605671 358 ntBASIC0.8□□□□□ -2.28
NUP98P52948 AL138955.1-201ENST00000622881 1040 ntBASIC0.8□□□□□ -2.28
NUP98P52948 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
NUP98P52948 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
NUP98P52948 SNORD33-201ENST00000362761 85 ntBASIC0.79□□□□□ -2.28
NUP98P52948 RNU6-1164P-201ENST00000364428 107 ntBASIC0.79□□□□□ -2.28
NUP98P52948 RPL37P10-201ENST00000412884 288 ntBASIC0.79□□□□□ -2.28
NUP98P52948 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.79□□□□□ -2.28
NUP98P52948 RPS26P55-201ENST00000471178 356 ntBASIC0.79□□□□□ -2.28
NUP98P52948 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
NUP98P52948 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.79□□□□□ -2.28
NUP98P52948 AC023538.1-201ENST00000534576 736 ntBASIC0.79□□□□□ -2.28
NUP98P52948 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.79□□□□□ -2.28
NUP98P52948 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.79□□□□□ -2.28
NUP98P52948 AC093648.1-201ENST00000623546 606 ntBASIC0.79□□□□□ -2.28
NUP98P52948 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
NUP98P52948 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
NUP98P52948 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
NUP98P52948 RNU6-1010P-201ENST00000362757 107 ntBASIC0.78□□□□□ -2.28
NUP98P52948 RNU6-289P-201ENST00000364093 107 ntBASIC0.78□□□□□ -2.28
NUP98P52948 RNU6-207P-201ENST00000384137 107 ntBASIC0.78□□□□□ -2.28
NUP98P52948 MIR597-201ENST00000384968 97 ntBASIC0.78□□□□□ -2.28
NUP98P52948 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.78□□□□□ -2.28
NUP98P52948 MRPS36P1-201ENST00000421291 307 ntBASIC0.78□□□□□ -2.28
NUP98P52948 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.78□□□□□ -2.28
NUP98P52948 MTND4P25-201ENST00000441039 533 ntBASIC0.78□□□□□ -2.28
NUP98P52948 RPL39P29-201ENST00000447779 157 ntBASIC0.78□□□□□ -2.28
NUP98P52948 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
NUP98P52948 AC087477.1-201ENST00000465747 340 ntBASIC0.78□□□□□ -2.28
NUP98P52948 AC093259.1-201ENST00000509755 300 ntBASIC0.78□□□□□ -2.28
NUP98P52948 AC104072.1-201ENST00000568817 668 ntBASIC0.78□□□□□ -2.28
NUP98P52948 MIR4711-201ENST00000578274 70 ntBASIC0.78□□□□□ -2.28
NUP98P52948 BNIP3P27-201ENST00000599991 412 ntBASIC0.78□□□□□ -2.28
NUP98P52948 AL590095.2-201ENST00000604136 117 ntBASIC0.78□□□□□ -2.28
NUP98P52948 RPL21P136-201ENST00000605378 396 ntBASIC0.78□□□□□ -2.28
NUP98P52948 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.78□□□□□ -2.28
NUP98P52948 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.78□□□□□ -2.29
NUP98P52948 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.78□□□□□ -2.29
NUP98P52948 USP9YP35-201ENST00000435696 412 ntBASIC0.78□□□□□ -2.29
NUP98P52948 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
NUP98P52948 RPL39P36-201ENST00000490784 156 ntBASIC0.78□□□□□ -2.29
NUP98P52948 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.78□□□□□ -2.29
NUP98P52948 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.78□□□□□ -2.29
NUP98P52948 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.78□□□□□ -2.29
NUP98P52948 AP003122.4-201ENST00000530980 758 ntBASIC0.78□□□□□ -2.29
NUP98P52948 AC012467.1-201ENST00000607740 256 ntBASIC0.78□□□□□ -2.29
NUP98P52948 AC078880.5-201ENST00000617845 421 ntBASIC0.78□□□□□ -2.29
NUP98P52948 AC130454.1-201ENST00000622948 401 ntBASIC0.78□□□□□ -2.29
NUP98P52948 AL136313.1-201ENST00000624804 202 ntBASIC0.78□□□□□ -2.29
NUP98P52948 Y_RNA.99-201ENST00000363138 105 ntBASIC0.77□□□□□ -2.29
NUP98P52948 CBX3P9-201ENST00000402326 552 ntBASIC0.77□□□□□ -2.29
NUP98P52948 MTCO1P44-201ENST00000441935 243 ntBASIC0.77□□□□□ -2.29
NUP98P52948 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.77□□□□□ -2.29
NUP98P52948 PAXBP1P1-201ENST00000449315 447 ntBASIC0.77□□□□□ -2.29
NUP98P52948 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.77□□□□□ -2.29
NUP98P52948 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.77□□□□□ -2.29
NUP98P52948 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.77□□□□□ -2.29
NUP98P52948 UBL5P1-201ENST00000507979 193 ntBASIC0.77□□□□□ -2.29
NUP98P52948 SNORA31.19-201ENST00000517079 126 ntBASIC0.77□□□□□ -2.29
NUP98P52948 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.77□□□□□ -2.29
NUP98P52948 AC018630.3-201ENST00000542637 96 ntBASIC0.77□□□□□ -2.29
NUP98P52948 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
NUP98P52948 AC002400.1-201ENST00000569310 726 ntBASIC0.77□□□□□ -2.29
NUP98P52948 MIR3937-201ENST00000580135 106 ntBASIC0.77□□□□□ -2.29
NUP98P52948 AC243829.6-201ENST00000612652 106 ntBASIC0.77□□□□□ -2.29
NUP98P52948 AC112204.3-201ENST00000623822 332 ntBASIC0.77□□□□□ -2.29
NUP98P52948 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
NUP98P52948 RNU6-744P-201ENST00000365557 107 ntBASIC0.76□□□□□ -2.29
NUP98P52948 RNU6-1316P-201ENST00000384242 108 ntBASIC0.76□□□□□ -2.29
NUP98P52948 MIR29B2-201ENST00000385055 81 ntBASIC0.76□□□□□ -2.29
NUP98P52948 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.76□□□□□ -2.29
NUP98P52948 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.76□□□□□ -2.29
NUP98P52948 HMGB1P28-201ENST00000507778 552 ntBASIC0.76□□□□□ -2.29
NUP98P52948 AP003392.2-201ENST00000527269 208 ntBASIC0.76□□□□□ -2.29
NUP98P52948 DEFB108A-201ENST00000530110 222 ntBASIC0.76□□□□□ -2.29
NUP98P52948 AP003034.1-201ENST00000534621 422 ntBASIC0.76□□□□□ -2.29
NUP98P52948 AC136618.2-201ENST00000575091 400 ntBASIC0.76□□□□□ -2.29
NUP98P52948 AC007742.2-201ENST00000618226 398 ntBASIC0.76□□□□□ -2.29
NUP98P52948 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.76□□□□□ -2.29
NUP98P52948 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
NUP98P52948 RNA5SP457-201ENST00000363657 124 ntBASIC0.75□□□□□ -2.29
NUP98P52948 RNA5SP390-201ENST00000410191 113 ntBASIC0.75□□□□□ -2.29
NUP98P52948 Y_RNA.597-201ENST00000410463 100 ntBASIC0.75□□□□□ -2.29
NUP98P52948 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.75□□□□□ -2.29
NUP98P52948 CR769776.1-201ENST00000441254 787 ntBASIC0.75□□□□□ -2.29
NUP98P52948 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.75□□□□□ -2.29
NUP98P52948 AC011005.2-201ENST00000487324 359 ntBASIC0.75□□□□□ -2.29
NUP98P52948 AC105313.1-201ENST00000509121 353 ntBASIC0.75□□□□□ -2.29
NUP98P52948 SNORD116-28-201ENST00000516123 91 ntBASIC0.75□□□□□ -2.29
NUP98P52948 AC021451.1-201ENST00000523498 1129 ntBASIC0.75□□□□□ -2.29
NUP98P52948 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.75□□□□□ -2.29
NUP98P52948 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.75□□□□□ -2.29
NUP98P52948 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.75□□□□□ -2.29
NUP98P52948 Z82243.1-201ENST00000609432 473 ntBASIC0.75□□□□□ -2.29
NUP98P52948 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.75□□□□□ -2.29
NUP98P52948 AC099654.9-201ENST00000637055 678 ntBASIC0.75□□□□□ -2.29
NUP98P52948 OR4G2P-201ENST00000328113 903 ntBASIC0.75□□□□□ -2.29
NUP98P52948 Y_RNA.115-201ENST00000363272 98 ntBASIC0.75□□□□□ -2.29
NUP98P52948 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms