Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 MIR1321-201ENST00000637766 79 ntBASIC2.27□□□□□ -2.05
CDX1P47902 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CDX1P47902 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CDX1P47902 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.27□□□□□ -2.05
CDX1P47902 OR4G1P-203ENST00000641984 1631 ntBASIC2.27□□□□□ -2.05
CDX1P47902 AL365361.1-201ENST00000566942 3481 ntBASIC2.27□□□□□ -2.05
CDX1P47902 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.27□□□□□ -2.05
CDX1P47902 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CDX1P47902 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CDX1P47902 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CDX1P47902 Y_RNA.9-201ENST00000362354 101 ntBASIC2.26□□□□□ -2.05
CDX1P47902 RNU6-1210P-201ENST00000363775 107 ntBASIC2.26□□□□□ -2.05
CDX1P47902 SNORA80A-201ENST00000363922 136 ntBASIC2.26□□□□□ -2.05
CDX1P47902 RNU6-1222P-201ENST00000384615 107 ntBASIC2.26□□□□□ -2.05
CDX1P47902 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CDX1P47902 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.26□□□□□ -2.05
CDX1P47902 MTCO1P20-201ENST00000425366 358 ntBASIC2.26□□□□□ -2.05
CDX1P47902 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.26□□□□□ -2.05
CDX1P47902 MTND1P34-201ENST00000438556 671 ntBASIC2.26□□□□□ -2.05
CDX1P47902 AC243964.1-201ENST00000441814 261 ntBASIC2.26□□□□□ -2.05
CDX1P47902 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.26□□□□□ -2.05
CDX1P47902 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CDX1P47902 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.26□□□□□ -2.05
CDX1P47902 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.26□□□□□ -2.05
CDX1P47902 AL121594.1-201ENST00000475906 575 ntBASIC2.26□□□□□ -2.05
CDX1P47902 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.26□□□□□ -2.05
CDX1P47902 RNU6-323P-201ENST00000521915 107 ntBASIC2.26□□□□□ -2.05
CDX1P47902 COPS8P3-201ENST00000526024 482 ntBASIC2.26□□□□□ -2.05
CDX1P47902 ZNF519P2-201ENST00000557032 169 ntBASIC2.26□□□□□ -2.05
CDX1P47902 AC093249.1-201ENST00000567049 203 ntBASIC2.26□□□□□ -2.05
CDX1P47902 AL357078.3-201ENST00000607528 618 ntBASIC2.26□□□□□ -2.05
CDX1P47902 AC068137.4-201ENST00000638485 296 ntBASIC2.26□□□□□ -2.05
CDX1P47902 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CDX1P47902 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
CDX1P47902 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CDX1P47902 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CDX1P47902 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CDX1P47902 Y_RNA.40-201ENST00000362645 93 ntBASIC2.25□□□□□ -2.05
CDX1P47902 RNU1-35P-201ENST00000362782 153 ntBASIC2.25□□□□□ -2.05
CDX1P47902 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CDX1P47902 Y_RNA.402-201ENST00000383972 102 ntBASIC2.25□□□□□ -2.05
CDX1P47902 Y_RNA.516-201ENST00000384541 124 ntBASIC2.25□□□□□ -2.05
CDX1P47902 Y_RNA.554-201ENST00000384672 102 ntBASIC2.25□□□□□ -2.05
CDX1P47902 RN7SKP158-201ENST00000410453 326 ntBASIC2.25□□□□□ -2.05
CDX1P47902 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.25□□□□□ -2.05
CDX1P47902 USP9YP8-201ENST00000441913 500 ntBASIC2.25□□□□□ -2.05
CDX1P47902 MRPL50P4-201ENST00000446432 475 ntBASIC2.25□□□□□ -2.05
CDX1P47902 AC013470.1-201ENST00000453438 462 ntBASIC2.25□□□□□ -2.05
CDX1P47902 AP001486.1-201ENST00000463339 476 ntBASIC2.25□□□□□ -2.05
CDX1P47902 AL049873.1-201ENST00000480540 376 ntBASIC2.25□□□□□ -2.05
CDX1P47902 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.25□□□□□ -2.05
CDX1P47902 SNORA9.3-201ENST00000516383 129 ntBASIC2.25□□□□□ -2.05
CDX1P47902 RNU6-586P-201ENST00000517265 104 ntBASIC2.25□□□□□ -2.05
CDX1P47902 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.25□□□□□ -2.05
CDX1P47902 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.25□□□□□ -2.05
CDX1P47902 AC087854.1-201ENST00000519706 414 ntBASIC2.25□□□□□ -2.05
CDX1P47902 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.25□□□□□ -2.05
CDX1P47902 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.25□□□□□ -2.05
CDX1P47902 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.25□□□□□ -2.05
CDX1P47902 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.25□□□□□ -2.05
CDX1P47902 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.25□□□□□ -2.05
CDX1P47902 BNIP3P16-201ENST00000589779 534 ntBASIC2.25□□□□□ -2.05
CDX1P47902 AC010525.2-201ENST00000590920 195 ntBASIC2.25□□□□□ -2.05
CDX1P47902 AL121757.2-201ENST00000611223 313 ntBASIC2.25□□□□□ -2.05
CDX1P47902 FER-210ENST00000628534 558 ntTSL 5 BASIC2.25□□□□□ -2.05
CDX1P47902 AC068137.3-201ENST00000639191 341 ntBASIC2.25□□□□□ -2.05
CDX1P47902 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CDX1P47902 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CDX1P47902 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.25□□□□□ -2.05
CDX1P47902 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.25□□□□□ -2.05
CDX1P47902 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.24□□□□□ -2.05
CDX1P47902 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CDX1P47902 Y_RNA.38-201ENST00000362617 102 ntBASIC2.24□□□□□ -2.05
CDX1P47902 RNU6-1090P-201ENST00000364065 94 ntBASIC2.24□□□□□ -2.05
CDX1P47902 Y_RNA.231-201ENST00000364358 102 ntBASIC2.24□□□□□ -2.05
CDX1P47902 SNORA80E-201ENST00000384744 137 ntBASIC2.24□□□□□ -2.05
CDX1P47902 MIR561-201ENST00000385216 97 ntBASIC2.24□□□□□ -2.05
CDX1P47902 RNU6-908P-201ENST00000410160 94 ntBASIC2.24□□□□□ -2.05
CDX1P47902 AL117339.3-201ENST00000418733 162 ntBASIC2.24□□□□□ -2.05
CDX1P47902 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.24□□□□□ -2.05
CDX1P47902 ERLEC1P1-201ENST00000433806 578 ntBASIC2.24□□□□□ -2.05
CDX1P47902 snoU13.14-201ENST00000459372 104 ntBASIC2.24□□□□□ -2.05
CDX1P47902 RNU6-1208P-201ENST00000459588 107 ntBASIC2.24□□□□□ -2.05
CDX1P47902 RPS29P26-201ENST00000477483 171 ntBASIC2.24□□□□□ -2.05
CDX1P47902 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.24□□□□□ -2.05
CDX1P47902 RPL30P1-201ENST00000488676 339 ntBASIC2.24□□□□□ -2.05
CDX1P47902 RPS27P27-201ENST00000498779 255 ntBASIC2.24□□□□□ -2.05
CDX1P47902 RPL38P4-201ENST00000502376 214 ntBASIC2.24□□□□□ -2.05
CDX1P47902 SNORA19.2-201ENST00000516013 114 ntBASIC2.24□□□□□ -2.05
CDX1P47902 MTND1P35-201ENST00000526739 508 ntBASIC2.24□□□□□ -2.05
CDX1P47902 AC109635.3-201ENST00000529536 185 ntBASIC2.24□□□□□ -2.05
CDX1P47902 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.24□□□□□ -2.05
CDX1P47902 AC091135.1-201ENST00000585943 307 ntBASIC2.24□□□□□ -2.05
CDX1P47902 RNU6-89P-201ENST00000606519 100 ntBASIC2.24□□□□□ -2.05
CDX1P47902 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.24□□□□□ -2.05
CDX1P47902 AC241585.2-209ENST00000638217 143 ntBASIC2.24□□□□□ -2.05
CDX1P47902 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CDX1P47902 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.24□□□□□ -2.05
CDX1P47902 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
CDX1P47902 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms