Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AL138976.2-201ENST00000563989 694 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.41□□□□□ -2.02
NEDD4P46934 AC091152.3-201ENST00000604227 325 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 Z82243.1-201ENST00000609432 473 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 DISC2.1-201ENST00000612827 205 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 AC002064.3-201ENST00000623448 346 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.41□□□□□ -2.02
NEDD4P46934 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
NEDD4P46934 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.02
NEDD4P46934 AC093536.2-201ENST00000565257 1406 ntBASIC2.4□□□□□ -2.02
NEDD4P46934 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
NEDD4P46934 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NEDD4P46934 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NEDD4P46934 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.4□□□□□ -2.03
NEDD4P46934 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 RNU6-384P-201ENST00000364900 104 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 RNU6-898P-201ENST00000365627 104 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 Y_RNA.450-201ENST00000384198 113 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 Y_RNA.554-201ENST00000384672 102 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 RNU6-19P-201ENST00000384718 107 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 SNORD37.1-201ENST00000390968 65 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 SNORA16.2-201ENST00000390991 127 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 RNU6-780P-201ENST00000391030 104 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 ARL5AP1-201ENST00000418991 388 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 ZNF885P-201ENST00000420174 1098 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.4□□□□□ -2.03
NEDD4P46934 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.4□□□□□ -2.03
NEDD4P46934 PRPS1P1-201ENST00000445305 876 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 UBBP3-201ENST00000445497 241 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 AL021397.1-201ENST00000451806 248 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.4□□□□□ -2.03
NEDD4P46934 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.4□□□□□ -2.03
NEDD4P46934 AC233279.1-201ENST00000455300 423 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.4□□□□□ -2.03
NEDD4P46934 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.4□□□□□ -2.03
NEDD4P46934 RNU1-86P-201ENST00000516108 154 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 RNU1-107P-201ENST00000516617 154 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 MTND1P5-201ENST00000517906 940 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 AK6P1-201ENST00000540219 478 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 AC020895.1-201ENST00000595362 272 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 AC005261.5-201ENST00000596280 355 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.4□□□□□ -2.03
NEDD4P46934 AC090517.2-201ENST00000614966 680 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 AL031601.2-202ENST00000622650 282 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 SCARNA4-202ENST00000625402 129 ntBASIC2.4□□□□□ -2.03
NEDD4P46934 FER-210ENST00000628534 558 ntTSL 5 BASIC2.4□□□□□ -2.03
NEDD4P46934 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
NEDD4P46934 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.39□□□□□ -2.03
NEDD4P46934 AC027514.1-201ENST00000588561 1603 ntBASIC2.39□□□□□ -2.03
NEDD4P46934 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
NEDD4P46934 RNA5SP393-201ENST00000363423 117 ntBASIC2.39□□□□□ -2.03
NEDD4P46934 RNU6-82P-201ENST00000363970 107 ntBASIC2.39□□□□□ -2.03
NEDD4P46934 SNORD56.5-201ENST00000364281 72 ntBASIC2.39□□□□□ -2.03
NEDD4P46934 RNU2-3P-201ENST00000410144 191 ntBASIC2.39□□□□□ -2.03
NEDD4P46934 RNU6-908P-201ENST00000410160 94 ntBASIC2.39□□□□□ -2.03
NEDD4P46934 CYCSP33-201ENST00000414485 327 ntBASIC2.39□□□□□ -2.03
NEDD4P46934 BX682237.1-201ENST00000415016 335 ntBASIC2.39□□□□□ -2.03
NEDD4P46934 EIF1P1-201ENST00000421436 341 ntBASIC2.39□□□□□ -2.03
NEDD4P46934 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.39□□□□□ -2.03
NEDD4P46934 MTCO1P20-201ENST00000425366 358 ntBASIC2.39□□□□□ -2.03
NEDD4P46934 AC027124.2-201ENST00000428249 105 ntBASIC2.39□□□□□ -2.03
NEDD4P46934 AC010095.1-201ENST00000443543 144 ntBASIC2.39□□□□□ -2.03
NEDD4P46934 AC092001.1-201ENST00000453012 261 ntBASIC2.39□□□□□ -2.03
NEDD4P46934 AL441985.1-201ENST00000457727 251 ntBASIC2.39□□□□□ -2.03
NEDD4P46934 RNU7-167P-201ENST00000459160 62 ntBASIC2.39□□□□□ -2.03
NEDD4P46934 UBL5P3-201ENST00000475112 231 ntBASIC2.39□□□□□ -2.03
NEDD4P46934 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
NEDD4P46934 RNU6-581P-201ENST00000516214 105 ntBASIC2.39□□□□□ -2.03
NEDD4P46934 AP003033.1-201ENST00000527244 415 ntBASIC2.39□□□□□ -2.03
NEDD4P46934 BNIP3P6-201ENST00000549284 499 ntBASIC2.39□□□□□ -2.03
NEDD4P46934 AP003465.2-201ENST00000602571 373 ntBASIC2.39□□□□□ -2.03
NEDD4P46934 U2.17-201ENST00000611454 95 ntBASIC2.39□□□□□ -2.03
NEDD4P46934 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
NEDD4P46934 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.38□□□□□ -2.03
NEDD4P46934 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.38□□□□□ -2.03
NEDD4P46934 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NEDD4P46934 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
NEDD4P46934 RNU6-72P-201ENST00000384285 79 ntBASIC2.38□□□□□ -2.03
NEDD4P46934 Y_RNA.599-201ENST00000410489 109 ntBASIC2.38□□□□□ -2.03
NEDD4P46934 RPS3AP44-201ENST00000425466 790 ntBASIC2.38□□□□□ -2.03
NEDD4P46934 PTGES3P4-201ENST00000426243 356 ntBASIC2.38□□□□□ -2.03
NEDD4P46934 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.38□□□□□ -2.03
NEDD4P46934 C8orf59P1-201ENST00000429930 303 ntBASIC2.38□□□□□ -2.03
NEDD4P46934 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.38□□□□□ -2.03
NEDD4P46934 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
NEDD4P46934 RPL38P4-201ENST00000502376 214 ntBASIC2.38□□□□□ -2.03
NEDD4P46934 SCARNA11.3-201ENST00000517276 130 ntBASIC2.38□□□□□ -2.03
NEDD4P46934 AP004607.1-201ENST00000524456 203 ntBASIC2.38□□□□□ -2.03
NEDD4P46934 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.38□□□□□ -2.03
NEDD4P46934 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.38□□□□□ -2.03
NEDD4P46934 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.38□□□□□ -2.03
NEDD4P46934 MIR5089-201ENST00000580047 84 ntBASIC2.38□□□□□ -2.03
NEDD4P46934 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
NEDD4P46934 AP003400.5-201ENST00000624827 617 ntBASIC2.38□□□□□ -2.03
NEDD4P46934 AC138915.1-201ENST00000565427 1685 ntBASIC2.37□□□□□ -2.03
NEDD4P46934 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.37□□□□□ -2.03
NEDD4P46934 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NEDD4P46934 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms